| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2423 |
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| Symbol | |
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| ID | 5609834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2944420 |
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| End bp | 2945490 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933334 |
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| Product | iron-containing alcohol dehydrogenase |
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| Protein accession | YP_001474160 |
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| Protein GI | 157375560 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.195896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000137469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTTTTA AAAATTTCAA ATGCGTACCC AAAATGATTT TTGGTCGTGG TTCATTTGCC
GACCTTGATA AAGTCTTGGG CGAAGAACGT AAAGCAGAAG AAGATTTCGT CGTATTTCTT
GTCGATGATG TGCATCAGGA CAAGCCACTG GGTGGCCGTG TTCCGGTAAA AGCTCATGAT
CTGCTTATCT ATGTCAACGT TGACGACGAG CCAACGACTA AGCAAGTCGA TGCCTTAACT
GAACAAGTTC AAGCTTTCAG CAAAAATCAG CCAGTCAGTG TTGTGGGACT GGGCGGCGGT
TCGACACTGG ATTTAGCAAA AGCCGTTTCG CTGATGCTAA CTAACCCAGG TGGCTCAGCG
ATGTACCAAG GTTGGGACCT GATTAAGAAC CCGGCTATTC ACCATATCGG TATACCAACT
GTCTCCGGTA CGGGTGCTGA AGCGTCTCGT ACTGCCGTGC TTTGTGGTCC TGTTCGTAAG
CTGGGTCTAA ACTCAGACTA CACAGTATTT GATCAGATCA TCATGGACTC AGAGCTCATT
GCCGGTGTGC CAACCGATCA ATGGTTCTAC ACCGGTATGG ATTGCTATAT TCACTGTGTT
GAGTCACTGG AAGGGACTTA CCTCAACGAA TTTGCCAAGG CTTTCGCTGA AAAATCGATG
GATCTATGTC GTGAAGTCTA CATCGACGAT CATGCTGAAA AAGCCGATAA GTTGATGATG
GCCTCCTATA TGGGCGGAAT GAGTATCGCG TATAGCCAGG TCGGTGCCTG TCATGCCGTC
TCTTATGGTC TGGGCTATGT CTTAGGCTAC CATCATGGTA TCGGTAACTG TCTTGCCTTC
GATGTACTCG AAGAGTTCTA CCCTGAAGGC GTTGCAGAGT TCCGTAAGAT GATGATTAAG
CACAACATCG TGCTCCCGAA GAACATCTGT AAAGATCTTC CCGATGAAAC GATCGCTAAG
ATGGTCGCCG TGACTAAGAG CATGGGACCA CTTTGGGATA ACGTTTATGG CGAAGGTTGG
GAAGAGAAAG TGACCGACGA GATGCTGACT AAACTGTTCC GCCGCATCTA G
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| Protein sequence | MSFKNFKCVP KMIFGRGSFA DLDKVLGEER KAEEDFVVFL VDDVHQDKPL GGRVPVKAHD
LLIYVNVDDE PTTKQVDALT EQVQAFSKNQ PVSVVGLGGG STLDLAKAVS LMLTNPGGSA
MYQGWDLIKN PAIHHIGIPT VSGTGAEASR TAVLCGPVRK LGLNSDYTVF DQIIMDSELI
AGVPTDQWFY TGMDCYIHCV ESLEGTYLNE FAKAFAEKSM DLCREVYIDD HAEKADKLMM
ASYMGGMSIA YSQVGACHAV SYGLGYVLGY HHGIGNCLAF DVLEEFYPEG VAEFRKMMIK
HNIVLPKNIC KDLPDETIAK MVAVTKSMGP LWDNVYGEGW EEKVTDEMLT KLFRRI
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