Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2397 |
Symbol | |
ID | 5613644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2918227 |
End bp | 2918685 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640933308 |
Product | hypothetical protein |
Protein accession | YP_001474134 |
Protein GI | 157375534 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTAA GCCCAAACTT ATTTAAACGA TTACTTAATC TTTACCCGCC TTACCTCGGA GCGGGCATTA AAATTACCTA TATTAGCCAG GATTGGCGTG AGCTACATGT ATCCATGTCT GTGCGTTGGT TTAATCGTAA CGCGGTTAAT ACCCACTTTG GCGGTAGTCT CTACTCCATG GTCGATCCAC ATCTGATGTT ACTTTTGATG CGGCTGCTCG GTGATGGATA CTGGGTATGG GACAGTGCAG CAAATATCGA GTTTTTAAAG GCGACCAGAA AAACGGTGCG ATGTGTGATC GCAATTTCAG ATGACCAATT GGAGCAAATT AAACTTAAAA CAGATAGTGG TGAGAAATAT TTCCCTTCAT TCACTTTAGA GATAAAAGAT GAAATGGGTG ATGTGATAGC CAAGGTGAAT AAGACTCTCT ATGTAAAGAA AAAGCCGCAC AAGACTTAG
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Protein sequence | MKLSPNLFKR LLNLYPPYLG AGIKITYISQ DWRELHVSMS VRWFNRNAVN THFGGSLYSM VDPHLMLLLM RLLGDGYWVW DSAANIEFLK ATRKTVRCVI AISDDQLEQI KLKTDSGEKY FPSFTLEIKD EMGDVIAKVN KTLYVKKKPH KT
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