| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2346 |
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| Symbol | |
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| ID | 5611325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2852754 |
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| End bp | 2854088 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933257 |
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| Product | deoxyguanosinetriphosphate triphosphohydrolase-like protein |
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| Protein accession | YP_001474083 |
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| Protein GI | 157375483 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0232] dGTP triphosphohydrolase |
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| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.309418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000067508 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGAGT CTCTATGGCA CGAAAGGCGT CTGACGGAAG AGAAGAAAAG GCGCAACGAT
CATCGCAGTC CCTATCAAAG GGATCGAGCG CGGATCCTTC ACTCCGCGGC ATTCAGACGT
TTGCAGGCTA AGACACAAGT GCTCGGTGTA GGCATGAACG ATTTCTACCG CACCCGACTC
ACTCACTCAT TAGAGGTGTC TCAAATAGGA ACCGGCATTC GCGCTCAGCT AAAACAAAAA
CGGCCGGAAT TTGATCACCT GTTTGATTCA ATGAGTTTAA TTGAATCTCT CTGCCTCGCT
CACGATATCG GACACCCGCC ATTTGGCCAT GGCGGAGAGG TGGCACTCAA CTATATGATG
CGCGATCACG GCGGCTTCGA AGGAAATGGT CAAACATTCA GAATACTCAC AGGACTGGAA
CCCTATACCG AATACTATGG CATGAACCTG TGCAGGCGTA CCCTGTTGGG GATCTTAAAA
TACCCGGCTC CTTACTCATC GTTATACCGC GCTTCCGGTA ACAAGCCAGT TAACAACATC
AGACAACTTA AGCCTTCACA GTGGACGCCG GTTAAGGGAA TTTTCGATGA TGACAGTGGG
ATTTTAGATT GGGTGCTCGA GCCGTTAAAC GGATCGGACC GGGAAAGATT TTTATCCCAC
CGTGATCTCG GTGCCAATAA GCACCTGCGT ACGCAATTTA AATCATTAGA TTGCTCTGTA
ATGGAGCTTG CCGATGACAT CGCTTATGCC GTACATGATC TCGAAGATGC TATTGTCATG
GGCATTGTCA CACCATCTCA ATGGCAGCAG GATGTGGCGT CGAAACTCAC GTTGAGTCAT
GATGCATGGA TTAAAGAGGA GTTTACCAAC ATAGGGCAGA ATCTGTTCTC TCATCAACAC
CATCTCAGAA AAGATGCTAT CGGCACTTTG GTCAATGGAT TTGTTACCGC CATCGATATC
GTTGAAGACA GAGCCTTTAC CGACCCCCTT TTACGTTTCA ATGCGGGCCT CGATACCAGT
TTCTCGGAAG CCTTAGAGGT GTTGAAGCAG TTTGTCTATA AATATGTGAT CAGAAAGCCT
GAGATCCAGA TGCTCGAATA CAAGGGACAA CAGATTGTGA TGGAGCTGTT TGAGGCATTT
GAGTCAGATC CGGAGCGATT ACTGCCAACC CATACTCAGG AGCGCTGGCG GGAGAGTCAC
ACCAAAGGGC TAAACAGCCA TCGAGTTATC GCCGATTACA TCTCTGGCAT GACAGATGAA
TTCGCCGCCA GACTTCATCA GCACCTCTTC AATCCTAAGG CAGGTTCTAT GATAGAGCTA
AATGGAGAGC TTTAG
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| Protein sequence | MTESLWHERR LTEEKKRRND HRSPYQRDRA RILHSAAFRR LQAKTQVLGV GMNDFYRTRL
THSLEVSQIG TGIRAQLKQK RPEFDHLFDS MSLIESLCLA HDIGHPPFGH GGEVALNYMM
RDHGGFEGNG QTFRILTGLE PYTEYYGMNL CRRTLLGILK YPAPYSSLYR ASGNKPVNNI
RQLKPSQWTP VKGIFDDDSG ILDWVLEPLN GSDRERFLSH RDLGANKHLR TQFKSLDCSV
MELADDIAYA VHDLEDAIVM GIVTPSQWQQ DVASKLTLSH DAWIKEEFTN IGQNLFSHQH
HLRKDAIGTL VNGFVTAIDI VEDRAFTDPL LRFNAGLDTS FSEALEVLKQ FVYKYVIRKP
EIQMLEYKGQ QIVMELFEAF ESDPERLLPT HTQERWRESH TKGLNSHRVI ADYISGMTDE
FAARLHQHLF NPKAGSMIEL NGEL
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