| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2312 |
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| Symbol | ansA |
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| ID | 5611121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2803811 |
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| End bp | 2804824 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640933222 |
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| Product | cytoplasmic asparaginase I |
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| Protein accession | YP_001474049 |
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| Protein GI | 157375449 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000448344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000363201 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAAAC GTTCCATATA TGTAGCTTAT ACCGGCGGTA CGATAGGCAT GCAAAAAACG
GCGCAAGGGT TCGCACCCGT CGCCGGATTT CTCACTAACT GTGTTAAGTC TATGCCTGAG
TTTTATCATG ACGAAATGCC TGATTTTGTC ATTCATGAAT ATTGCCCTCT CATAGACTCT
TCAGATATGG CGCCGACGGA TTGGCAGATG ATCGCCAATG ATATCAAAGC AAATTACGAA
GACTACGATG GATTTGTTAT CTTGCATGGT ACCGACACCA TGGCCTTTAC GGCATCTGCG
CTCTCATTTA TGTTGCAAGG ACTGTCTAAA CCCGTCATCG TGACCGGGTC TCAGATCCCG
CTGGCACAAC TGCGCTCTGA CGGTCAAACC AACCTGTTAA ATTCCCTCTA CATTGCGGCG
AACTACCCTG TTGCCGAAGT ATGTCTGTTT TTCAACAACA AGCTTTTCAG GGGAAATCGT
ACGACTAAGG CACATGCCGA CGGGTTCGGT GCCTTTGCTT CACCTAACTT CCCTCTTCTG
TTAGAGGCTG GCATAAAGAT TCGTCTAAAG GCGGGAAAAG TTGGCGGAGA TGAGAACAAG
CAACTCGACG TTGCCACCAT CAGTCCGCAA CCGATTGGTG TTGTCACCTT ATATCCCGGT
ATCACCACAG ATATTATTAA AAATATCCTC CAGCAACCGG TAAAAGCCTT GATTTTACTC
ACCTATGGTG TGGGTAATGC GCCACAAAAT CCGGCATTGC TGAAGGTGCT GTCAGATGCA
CATAAACGCG GCATCATACT GGTCAACCTG ACGCAATGCC TGCAGGGTAA GGTCAATATG
TCAGGCTACG CGACAGGCAA TGCATTAGAA GCGGCGGGCG TCATCAGCGG TTCAGATATG
ACTACAGAAG CGGCGTTAAC AAAACTTCAT TACTTACTCT CTAAATCGAT GTCGACGCAA
GAGATTAGAG AAGCAATGCA GCAAAATTTA ATCGGTGAAC TCACCGAAGA TTAA
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| Protein sequence | MTKRSIYVAY TGGTIGMQKT AQGFAPVAGF LTNCVKSMPE FYHDEMPDFV IHEYCPLIDS
SDMAPTDWQM IANDIKANYE DYDGFVILHG TDTMAFTASA LSFMLQGLSK PVIVTGSQIP
LAQLRSDGQT NLLNSLYIAA NYPVAEVCLF FNNKLFRGNR TTKAHADGFG AFASPNFPLL
LEAGIKIRLK AGKVGGDENK QLDVATISPQ PIGVVTLYPG ITTDIIKNIL QQPVKALILL
TYGVGNAPQN PALLKVLSDA HKRGIILVNL TQCLQGKVNM SGYATGNALE AAGVISGSDM
TTEAALTKLH YLLSKSMSTQ EIREAMQQNL IGELTED
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