| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2304 |
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| Symbol | |
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| ID | 5611116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2791824 |
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| End bp | 2792549 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933214 |
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| Product | 3-demethylubiquinone-9 3-methyltransferase |
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| Protein accession | YP_001474041 |
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| Protein GI | 157375441 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000612438 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGCAAG AAGTGAAGCA AGAGATCAAT GTCGACCCAC AAGAGATCGC CAAATTTGAG
AAAATGGCCG AAACCTGGTG GGATCCTGAA GGCGAATTTA AGCCATTACA TAAATTAAAT
CCGCTTCGCC TTAACTATAT CGACCAAACC AGCGGTGGCG TTTTTGGTAA ACGTATACTC
GATGTTGGCT GTGGTGGCGG TATTCTATCC GAGAGCATGG CGCGAATTGG TGCTATCGTC
GATGGTCTGG ATATGGGTAC TGAACCTTTA GACGTTGCAC GTCTGCATGC ATTAGAGATG
GATGTTGAAG TTAACTATAT TCAAGACACC GCCGAATCTC ATCGTGAAAC ACATAGAGAA
ACCTACGATA TCGTGACCTG TATGGAGATG CTAGAGCACG TCCCCAGCCC TCGCTCTGTA
GTGCAAGCTT GTGCCGACAT GGTAAAACCT GGCGGTTATG TTTTTTTCTC CACGATTAAT
CGTAATATCA GGGCATACGT CGAAACGATT TTAGGTGCCG AGTACCTGTT GAAGATGCTG
CCTGTCGGTA CACACGACCA TAATAAGTTT ATTAAGCCAT CTGAATTAAT CTCCTTGGCC
GAACATGCCG AACTGTTTTG TGAAGATGCT ACCGGTATCA GTTATAACCC GATCACCGAA
ACATTTACCT ACACCAAAAA TGTCGATGTT AACTATATGA TAGCGACCAG AAAGAGTATT
GATTAA
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| Protein sequence | MQQEVKQEIN VDPQEIAKFE KMAETWWDPE GEFKPLHKLN PLRLNYIDQT SGGVFGKRIL
DVGCGGGILS ESMARIGAIV DGLDMGTEPL DVARLHALEM DVEVNYIQDT AESHRETHRE
TYDIVTCMEM LEHVPSPRSV VQACADMVKP GGYVFFSTIN RNIRAYVETI LGAEYLLKML
PVGTHDHNKF IKPSELISLA EHAELFCEDA TGISYNPITE TFTYTKNVDV NYMIATRKSI
D
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