| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2302 |
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| Symbol | |
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| ID | 5611114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2787554 |
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| End bp | 2788648 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640933212 |
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| Product | phosphoserine aminotransferase |
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| Protein accession | YP_001474039 |
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| Protein GI | 157375439 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1932] Phosphoserine aminotransferase |
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| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.589874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000030251 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCACGA CATATAATTT CTGTGCAGGT CCCGCAATGT TACCCCAAGC CGTAATGAAG
AAAGCTCAGA GTGAGCTGCT CGACTGGAAC GGGCTGGGCA CATCGGTCAT GGAGATAAGC
CATCGCAGTA AAGAGTTTAT TGCCTTAACC GATAAAGCTG AGACCGACTT ACGTGAATTG
ATGTCAATTC CAGAAAATTA TCATGTGTTG TTTATGCATG GAGGCGGTCG TGGGCAGTTT
TCAGCAGTTG TGAATAATTT TCTCGGCGAG AATGGAAAAG CGCTCTATCT TGTCTCAGGA
AGTTGGTCTA AGTCTGCAGT AGATGAAGCC AGAAAGCTCA CCAGTGATGC ACAAATTGAT
ACCTTAGATC TGGTCGTGAA TGACAATGGT ATCGGCGCTG TTAGCATTCC TGAATTGACG
GGCGAAGCCG CGGATTATCG CTACCTGCAT TACTGTCCTA ATGAGACGGT TGATGGTATC
GAAATTTTTG AAGACATTAA CAGTCCTTGG CCTATCGTGG CCGATATGTC ATCCAATATC
ATGTCACGAG AGATCGATGT CAGTAAATTC GGTTTGATCT ATGCCGGCGC TCAGAAAAAT
ATTGGGCCAT CGGGTTTAAG CATCGTTATC GTGCGTGATG ACATGCTGGA ACTACCTAGT
TTGCCGCAAT CATCGATCAT GGATTATCGA TTAGCCGTTA AACATGGCTC TATGTATAAC
ACGCCGCCGA CGTTTGCATG GTACTTAGCT GCCGAAGTGT TTAAATGGTT AAAGAGCAGT
GGTGGTGTAG CGACAATGGC AGAGGTTAAT GCCAAAAAAG CCCAGCTTCT TTATGATTTT
ATTGATGGCT CCAATTTTTA TAACAATACC GTTTCAGCGC AGAACCGTTC CTTGATGAAT
GTGATATTTT ATCTGGCGAA TGAAGATAAT AATGCCGACT TCCTGGCCGA AGCGAGTAGA
GCGGGTTTAG TGGCGCTAAA AGGTCATCGA AGTGTCGGTG GTATGCGCGC CAGTATCTAT
AACGCCATGC CCATCGAAGG GGTAGAGAAG TTGGTTGAGT TTATGAAGGG CTTTGCTGAA
AAAAATAACG GCTAG
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| Protein sequence | MSTTYNFCAG PAMLPQAVMK KAQSELLDWN GLGTSVMEIS HRSKEFIALT DKAETDLREL
MSIPENYHVL FMHGGGRGQF SAVVNNFLGE NGKALYLVSG SWSKSAVDEA RKLTSDAQID
TLDLVVNDNG IGAVSIPELT GEAADYRYLH YCPNETVDGI EIFEDINSPW PIVADMSSNI
MSREIDVSKF GLIYAGAQKN IGPSGLSIVI VRDDMLELPS LPQSSIMDYR LAVKHGSMYN
TPPTFAWYLA AEVFKWLKSS GGVATMAEVN AKKAQLLYDF IDGSNFYNNT VSAQNRSLMN
VIFYLANEDN NADFLAEASR AGLVALKGHR SVGGMRASIY NAMPIEGVEK LVEFMKGFAE
KNNG
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