| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2286 |
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| Symbol | |
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| ID | 5611493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2769241 |
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| End bp | 2769984 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933196 |
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| Product | DTW domain-containing protein |
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| Protein accession | YP_001474023 |
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| Protein GI | 157375423 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3148] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000384037 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTTC ACCAGCACGC AGTACATAGG CTTTATCGAT ATCGTAAGGC TATTTCCACC
AAACCCTATG GAGCACGGGG GAAAAATTTG GTTCGTTGTG AGCAATGTCT ACTTGCAGAG
GTGTATTGCA CCTGTGAATC TCGCACACAG CTTGAATCGA ATAATGCTTT TTTATTGATA
ATGTACGATG ATGAAGTCTT AAAACCCAGT AATAGCGGGC GTTTAATTGC CGATCTCATT
CCCGATACCC ATGCCTATAT CTGGTCGCGT ACCCAAGCAA ATCGGAAGAT GTTGGCCTTG
ATCCAGAGTC CTGAATATCA ACCCTTCGTA ATTTTTCCCG GTGAATATGC TTATGACAAC
CAGCCTATAG TCGACAAAGT TATCCCTTCG TCCATTGGTG AGGGTAAGAG GCCCCTGTTT
ATCATGCTCG ATGGTAGTTG GCGTGAAGCG ATTAAGATGT TTCGTAAAAG CCCCTATCTT
CATTCATTGC CGTTATTGTC ATTTACGCCG GAAACGGCTG CAAAGTATGG TTTACGAAAA
GGCAGTCGAG ATTTTCAATT GGGAACGGCG GAGGTTGCGG CCTTGGCTCT GGGGGCGTCG
GGTGAGCAAG GCAATGCCGA GTCACTCAAC GCCTGGTTTG AACTCTTTAT CGAGTCGTCT
ATTTTTAGCC GAAGCCGTAA AAGCACCTCA GATTTAACCC CCTTGATGGA GCTTACTCAG
GCGTTTAAAG CTAGTCTCAA ATAA
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| Protein sequence | MSFHQHAVHR LYRYRKAIST KPYGARGKNL VRCEQCLLAE VYCTCESRTQ LESNNAFLLI
MYDDEVLKPS NSGRLIADLI PDTHAYIWSR TQANRKMLAL IQSPEYQPFV IFPGEYAYDN
QPIVDKVIPS SIGEGKRPLF IMLDGSWREA IKMFRKSPYL HSLPLLSFTP ETAAKYGLRK
GSRDFQLGTA EVAALALGAS GEQGNAESLN AWFELFIESS IFSRSRKSTS DLTPLMELTQ
AFKASLK
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