| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2214 |
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| Symbol | |
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| ID | 5613123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2671450 |
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| End bp | 2672418 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933118 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001473951 |
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| Protein GI | 157375351 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCT TCTGGAGTAT ATGGATTACC GTACTCACTA TCGTGGTAAT CGTTGGATGT
TTTGTCCTTT TAAGAATTGT CTCTAAAAAC AACACGGGTG TTGAAGAAGG CAAGTCGATG
GGGCATAGCT TTGACGGCAT CGAAGAACTG AACAACCCAC TACCTAAGTG GTGGAGTTAT
CTGTTCTATG TCACCATCGT TTTTGGTGTT ATTTACTTAG CGCTTTATCC GGGTCTTGGA
AACTTCAAAG GTTTCTTAGG CTGGTCGAGT GCTAACCAAA GCATCGGAAC CGAGAATGGC
ATCGCAGCTG ATTCTAAAGC AGCGGTTGAG CTTGCGACTA AAGAAGGTCG TTGGGTTCAG
TATGACCAGG AAGTTAAGCG TGCCGATGAG AAATTTGGCC CTATCTTCAA GGCTTATGCT
GAAACGCCTC TCGATGAGTT GGTTAAGAAC GAAGAGGCCC TTAAAGTGGG TGGCCGTCTG
TTCTTACACA ATTGTTCGCA ATGTCATGGT AGTGATGCCC GTGGTAGTAA AGGCTTCCCT
AACCTGACAG ACGGTGATTG GTTATATGGT GGTGAGTTAG CCACTATTAA AACCTCTATC
ATGAATGGTC GTCATGGGAT GATGCCACCT AAAGGTGGTC TTCCAATCGA AGACAGTGAA
ATTAAAGGTT TGGCTGAGTA TGTTACTAAG CTTGCCGGTC GAGATCACGA TGAAGCCCTA
GCCGCTCAAG GTCAAGGCTC ATTCATGAAG GGCTGTTTCG CTTGTCATGG TATGGATGCG
ACGGGTAATA AGATGATGGG TGCGCCTAAT CTTACCAATA ACATCTGGTT GTATGGCGGT
AGCCGTGGTT CTATCGAACA GTCAATTAAG AATGGCCGTA GCGGTGTCAT GCCAGCTTGG
AAAGATGTGT TAGGTGAAGA GAAAGTTCAC GTTATCACAG CTTATGTTTA TAGCTTGTCA
AACAAGTAG
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| Protein sequence | MSSFWSIWIT VLTIVVIVGC FVLLRIVSKN NTGVEEGKSM GHSFDGIEEL NNPLPKWWSY
LFYVTIVFGV IYLALYPGLG NFKGFLGWSS ANQSIGTENG IAADSKAAVE LATKEGRWVQ
YDQEVKRADE KFGPIFKAYA ETPLDELVKN EEALKVGGRL FLHNCSQCHG SDARGSKGFP
NLTDGDWLYG GELATIKTSI MNGRHGMMPP KGGLPIEDSE IKGLAEYVTK LAGRDHDEAL
AAQGQGSFMK GCFACHGMDA TGNKMMGAPN LTNNIWLYGG SRGSIEQSIK NGRSGVMPAW
KDVLGEEKVH VITAYVYSLS NK
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