Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2210 |
Symbol | |
ID | 5613147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 2668465 |
End bp | 2668890 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640933114 |
Product | hypothetical protein |
Protein accession | YP_001473947 |
Protein GI | 157375347 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.120945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGGAT TATTTTGTTC ATCTTGCTCT CATGATGCTC CCAAAGATGT ATCAAAAACA ACCAAAGACA GCTCGCTTTG TGACTTTAAT GCGGGTAAGT GTACTCAATC TGTTGCTGGT GTTGGATTTG ACCTATTAAT CACCCCCTAC AATTCACCCA GTGAAAGGCC ATTAACCCTA GAGCTCATCA GCTCTGAACC CGTAAATAAC CTGGCTATGA GGGTTGAGGG AAGAGATATG TTTATGGGGG TTATTCCGGT TAATTTAACT AAAGTTGATG AAAACCTATA TAATGGTCAG CTGATATATG GTTCTTGTAG CAGTAATTAT ATGGTGTGGA GAGCCTTTGT TACTTTTAAT AAGGAAGGTT CTCAGCATAT CGTCATGTTC GACTTTCTTG CCGATAATGA AGAAAGCGAG CTTTAG
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Protein sequence | MLGLFCSSCS HDAPKDVSKT TKDSSLCDFN AGKCTQSVAG VGFDLLITPY NSPSERPLTL ELISSEPVNN LAMRVEGRDM FMGVIPVNLT KVDENLYNGQ LIYGSCSSNY MVWRAFVTFN KEGSQHIVMF DFLADNEESE L
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