| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2209 |
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| Symbol | |
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| ID | 5613146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2666770 |
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| End bp | 2668350 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640933113 |
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| Product | response regulator receiver modulated metal dependent phosphohydrolase |
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| Protein accession | YP_001473946 |
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| Protein GI | 157375346 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.195398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG ATATAGCAAA GAAAAGCCCC CTTTTTTCAG GTAAAAAAAA GGCGCCGGAA
GAGAGCTCTG GTCCGGCGTG GAAGATCCTT ATCGTGGACG ATGAACCCGA TGTCCATACC
GTAACCAAAT TAGCCCTATC CAGATTTAAA CTCGATAAGC GTTCACTTGA ATTTATCAAT
GCCTATAGCG GTGAAGAAGC AAAGCAAATC CTTATTAAAG AGGAAAATGT GGCAATGGCC
TTTGTCGATG TGGTGATGGA AAGCGATCAC GCTGGGCTTG AGTTGGTGAA ATGGATCAGA
GAGGATCTTA AAAATAGCTC CATCAGACTG ATACTCAGAA CGGGTCAACC CGGCCAGGCG
CCCGAAGAAG ATGTCATCGT CAATTATGAT ATCAATGACT ATAAGGCAAA GGCAGAACTC
GACTCCAGAA AGTTAGTCAC CAGTGTCTAC TCCGCTCTTC GCTCCTACCG GGATATCATG
TTGATTGAGG AGGCCAAGGA AAATCAAATT AAGCATAGAA AAGGGTTGGA AAGAGTCGTC
CAGGCCACAT CGGGTCTGTT TGAGTTACGT ACTCTATTTA ATTTTGCCGA TGGCCTGTTG
ACTCAGGTCG CGAACTTGTT AAATCTCGAC AGTGAAACCT TACTGCTGAC CTGTAATGCC
ATCGATGCAA TGAGCGAACA GGTCAATACC GATGAGCTAC ATATTCTCGC AGGTACCGGA
CAGTTCTCGA GCCATCATGA AAAGCCCGTG CCCGATCACA TCAGAAAGCT TTTACAGTCA
GCCCTTAAAC AGAAGCGTTG TTTATACGAA GAGGATTGTT TTATTGGGTA TTTCCCCGCC
AAGAGTGGCT GGATTAATCT GCTCTACATG GATGGGATCA GTAAAATTGA TGATCTGGAT
AAGAAGTTAA TAGACATTTT CGCTATCAAT GTCGGCGTCG CATTTGAAAA TTTACTGCTA
AATAAGGAAC TGGAAGATAC CCAATCTGAA CTGATTTTGC GTTTAGGAGA TGTTGTAGAG
AGTCGTTCTA AGGAGGCGGC TAACCATGTT AAGCGCATGG CCGAGTACTG TTATAAGCTG
GCGCTTATTT CGGGTATGGA AGAACATGAG GCCGATCTGA TAAAGCATGC CTCCCCGATG
CATGATATAG GTAAAATTGC TACGCCTGAT GCTGTGCTAT TAAAACCAGG TAAATTGAAC
GAAGAGGAGT GGAATGTGAT GAAGCAGCAC CCTGCTGTCG GTCATCAAAT TCTGGCTAAC
TCTGAGCGAC CAATTTTGAA GGCGGCAAGT ATCATCGCAC TTCAGCATCA TGAAAAATAT
GATGGTTCGG GTTACCCAAC AGGCTTGAGA GCTGATGAGA TCCATGTATT TGCCCGAATC
GTTGCCATCG CCGATGTATT TGACGCCCTC TCCCACGCTA GGTGTTATAA ACCTGAATGG
CCTTTAGATG AAGTGCTAAA GACAATGGAA GAAGGTTCTG GTTCACATTT TGACCCGGAT
TTGTTACGAC ACTTTATCGA TAATATTGAA GTGTTTACCA AAGTTAAAGA TGAACTGAGT
GACGAAAACC TACAGAGTTA A
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| Protein sequence | MLIDIAKKSP LFSGKKKAPE ESSGPAWKIL IVDDEPDVHT VTKLALSRFK LDKRSLEFIN
AYSGEEAKQI LIKEENVAMA FVDVVMESDH AGLELVKWIR EDLKNSSIRL ILRTGQPGQA
PEEDVIVNYD INDYKAKAEL DSRKLVTSVY SALRSYRDIM LIEEAKENQI KHRKGLERVV
QATSGLFELR TLFNFADGLL TQVANLLNLD SETLLLTCNA IDAMSEQVNT DELHILAGTG
QFSSHHEKPV PDHIRKLLQS ALKQKRCLYE EDCFIGYFPA KSGWINLLYM DGISKIDDLD
KKLIDIFAIN VGVAFENLLL NKELEDTQSE LILRLGDVVE SRSKEAANHV KRMAEYCYKL
ALISGMEEHE ADLIKHASPM HDIGKIATPD AVLLKPGKLN EEEWNVMKQH PAVGHQILAN
SERPILKAAS IIALQHHEKY DGSGYPTGLR ADEIHVFARI VAIADVFDAL SHARCYKPEW
PLDEVLKTME EGSGSHFDPD LLRHFIDNIE VFTKVKDELS DENLQS
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