Gene Ssed_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_2204 
Symbol 
ID5613075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp2661416 
End bp2661742 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content46% 
IMG OID640933108 
Producthypothetical protein 
Protein accessionYP_001473941 
Protein GI157375341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.145756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCCGATG GTCGTAATGT TCGCTTGCTT GAAGATTTCA CCTTTACTGA TGCCAATGGT 
ATCGAGTGGA AAGCAGAAGC AAACGACACG CCGGACGGCT CAAGTATTCC GCGACCTGCT
TGGACGCTGA TAGGTTCGCC GTTTGTTGGT AAGCACAGAA ACGCCAGTAT TGTGCATGAC
AAGTTTTGTG TTCTACGTGA AAGGTCAGGC CGGACACATA AGCAGGTGCA CAAGATGTAT
TACAACGCCT GTTTGTGTGC TGGGGTGGGT AAAATAAAAG CAAAAATGAT GTATTTAGCT
ATAAAAATAG GTGGTCCAAA ATGGTGA
 
Protein sequence
MPDGRNVRLL EDFTFTDANG IEWKAEANDT PDGSSIPRPA WTLIGSPFVG KHRNASIVHD 
KFCVLRERSG RTHKQVHKMY YNACLCAGVG KIKAKMMYLA IKIGGPKW