| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2134 |
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| Symbol | |
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| ID | 5610641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2581581 |
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| End bp | 2581961 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640933037 |
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| Product | DsrE family protein |
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| Protein accession | YP_001473871 |
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| Protein GI | 157375271 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2923] Uncharacterized protein involved in the oxidation of intracellular sulfur |
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| TIGRFAM ID | [TIGR03010] sulfur relay protein TusC/DsrF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0534452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0152295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTGTTG ATGAGCAGAT TAAAATGAAA AAAGTCGCGA TACTATTTCG TCGGGCGCCC
CATGGTTCTC CCCATGGCAG AGAGGCATTA GATCTCGCTC TCTTGAGTGC CAGTTTCGAG
CAGGAAGTGA GTTTGATTTT TGTCGATGAC GGCGTGCTTA ACCTTGTCAA AGATCAGCAA
CCTGAACGTG TTGGCGCGAA AGATTATATT GCCACTTTCG GCGCCCTCCC CCTGTATGAT
GTGGAGACTG TACTTGCCTG TGAAGAGTCT TTGGTTGAGT ATGGACTTGA TTTGACAGAC
CTCACCATTG AGGTAGATAA GGTATCCCCA TCATTAATCA CTGAGCAACT ATCGAAGGTT
GATGAGGTCT TGGTATTCTG A
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| Protein sequence | MIVDEQIKMK KVAILFRRAP HGSPHGREAL DLALLSASFE QEVSLIFVDD GVLNLVKDQQ
PERVGAKDYI ATFGALPLYD VETVLACEES LVEYGLDLTD LTIEVDKVSP SLITEQLSKV
DEVLVF
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