| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2103 |
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| Symbol | |
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| ID | 5612792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2545094 |
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| End bp | 2546617 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640933000 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473840 |
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| Protein GI | 157375240 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1600] Uncharacterized Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.66471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATG ATGCACAGAT CGGAGATGAG GCAACGACTA ACAGTTCACG CCGAAACTTC
CTTAAGTTGG GTGGAATTGC CGCAGCAACG GCCACAGTCG GCGCCGGTGC AGGTGCTGGT
TTCGTACTTG GCAGAGATCC CGATGCCAAT ATTGGCTGGG GAAGAACGGA AGCCGGTAAG
GATATGTACT TTAACCGCGA GGCATTCGAG GTTGATTTTC CGCCAACAAT GGAGGTGGTA
GGAAAAATTG AGCGACCAGA GTGGGGAGAC TACCTGTTTA ATCGTGCATT TAGTCTGGTT
AAATCGATTA AAGGGGGTTG GGTACCAAGT GAAGACTGGA CTCAAATTCC AGATCTCAGA
GTGAGAGAAT ACTACGCAAA ATACCCGAAG CGTTGGGAAG AGATGCTGCT GTCATTTAGC
GAAAAAGTAA AACATGACAA TAACATTGAA AAGCATCGCG ACAGATTCGC TCTTGCCTGG
GCCTATTCAG GTGCATACAG CAAAGGTTTA CACGCGGACT TTCCACCTGA GCCGACTGAG
CATCCCGATG TGGATGATTT CAAGTGGGTG CAGAGAGAGC CAAAGGAATT TAAGTCGCCT
AAGCATGCCT CTAAGTTGAT TAAACAGATG GCATTTAAGT TTGGTATGAG TCTGGTGGGT
ATCACTAAGC TTGATTCAAA TTTTGTATTT AAAAACATGA TGCGAGGCAT GCCTGAATGG
GGAGACGAAA TCCCAAAACA CTGGAAGAAT GTCATCGTGT TTGGCGTGCC GATGAACTGG
GATCCTATGT ATGCCGCGGT TGGTTATTCA ACTTCCTATG ATGCATATTA TCGCGCCAAG
ATGGCATCAG GGTTAATGGC AGCCTATTTA GGAGAGTTAG GGTATGCCGC TCGTCCACAG
TTCCCCGGTA ACAGTTATGA AGTGATTATG CCCCCCTTGG CCATGCTTGC AGGTCTCGGC
GAGTCGACGC GCAATGGGAT CTTGATGACG CCAGAAGTGG GGCCCAACAT TCGCCTCGCG
GCTGTGATCA CTGACTTGGA TCTGGAACAC GATAAGCCGA TAGATCTGAA CATGAAACAC
TTCTGTGAAA GTTGCAAAAT TTGCGCAGAT GCATGTCCGA GCGGTTCTAT CAGCAAAGCC
GATAAACCCG ATGATGTGGT TCGTGGTATA CGGAAGTATG CATTTAACCA GGATGGTTGT
TGGAGATTCT GGAATCAAGG GCCGACCCCG AGTGGTCTAG GCTGTCGAGT CTGTATCGCT
GTATGTCCGT ATACCCGAAA AAATAACTGG ATACATGCCT TAGTTAAACA GGCAGAACCC
AGAGACCCTA CCGGCGTTAC ACGTAATGCA TTATTAGCGA TGCAGCATAA TTTCTTCTAT
TACCCCGATG CAGAGTCATA TCATCCGGAG TGGAGTGGTG GCAATTTTGC AAGTTACCAT
CAGCCACCAG AGTGGATGAG AAGTGAAGAG TATCTGAAAG TCGAGAAGAC TTGGGAATAT
GACGGCAACT GGGAGGGTTT CTAA
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| Protein sequence | MKDDAQIGDE ATTNSSRRNF LKLGGIAAAT ATVGAGAGAG FVLGRDPDAN IGWGRTEAGK
DMYFNREAFE VDFPPTMEVV GKIERPEWGD YLFNRAFSLV KSIKGGWVPS EDWTQIPDLR
VREYYAKYPK RWEEMLLSFS EKVKHDNNIE KHRDRFALAW AYSGAYSKGL HADFPPEPTE
HPDVDDFKWV QREPKEFKSP KHASKLIKQM AFKFGMSLVG ITKLDSNFVF KNMMRGMPEW
GDEIPKHWKN VIVFGVPMNW DPMYAAVGYS TSYDAYYRAK MASGLMAAYL GELGYAARPQ
FPGNSYEVIM PPLAMLAGLG ESTRNGILMT PEVGPNIRLA AVITDLDLEH DKPIDLNMKH
FCESCKICAD ACPSGSISKA DKPDDVVRGI RKYAFNQDGC WRFWNQGPTP SGLGCRVCIA
VCPYTRKNNW IHALVKQAEP RDPTGVTRNA LLAMQHNFFY YPDAESYHPE WSGGNFASYH
QPPEWMRSEE YLKVEKTWEY DGNWEGF
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