Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2082 |
Symbol | |
ID | 5611288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2523128 |
End bp | 2524384 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640932979 |
Product | precorrin-6Y C(5,15)-methyltransferase (decarboxylating) |
Protein accession | YP_001473819 |
Protein GI | 157375219 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2241] Precorrin-6B methylase 1 [COG2242] Precorrin-6B methylase 2 |
TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit [TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGCA GTATTACCTT AATTGGAATC GGCGATGATG GTTGCGTTAG TTTAACCAGT CGCGCCATTA ACGCGGTAGC TCAAACAGAG TTACTGGCCG GCGCCACACG TCATCTTGAG TTCTTCCCTC AGTTCTGTGG TGAAAAATTA TCGTTTGTCA GTGGCCTCAA TGGATACCTT ACTCAAATCG TAGAGGCGGC AAAAGATAAA GATATCTGCG TGCTAGCCTC CGGAGACCCC CTGTTTTTCG GGATAGGTAA ACGGCTACTT GCCATGGTTG CAGCTGTAGA TGCCGCGATA AATGTAGAGG TGATCACCTC GCCCAGCAGT GTGCAACTGG CCTGCGCCAA AGCCTTGATC CCATCGGATA ACGTCAAGGT TATCTCTCTG CATGGCCGCG CTATTACGGG GATGGTAGCC CGCATGCAGC AGGGAGATCA TTTTGCGCTG CTTACCGACA ATGATCACAA TCCAGTGGCC ATAGCCAGAC ATCTGCTTAG CTATGATGAA ACCCTCTGGC GTCTGGTTCT GTGTGAGCAC CTGGGAGGCA GTAAAGAGCG TATCAGGGAG TTCACTGTCC AGGAGTTAGC CGCGACATCT ACAGATGATA TTGAGTCTCT CAACGTATTA CTCCTGCAGC GTCAGGGGCA AGCGTATTGG GGGGGCTTGG CAACGCATTG CCCGGATAGT GCTTATCAGG TGCTTACCCC ATTAAATGGT TTGATAACTA AGGCAATTAC TCGTGCGCTA GTTGTGGCGC GTTTAGGGTT AACCCCCTGC AGCGTTGTCT GGGATATAGG TTCAGGCTCA GGCTCCATCG CCATAGAAGC AGCGAAGCAG GCCTGGAATG GCCATGTCTA TGCCCTGGAA TGTAACCCCC AATGTTTCGA CGTGATCGGG CAAAACCAGA AGCGTCACAG AGTCGATAAT CTCACACTAG TTAAGAGTAA GGCGCCTTTA GGGTTAGATG AATTACCCGC CCCAGATGCC GTATTTGTCG GCGGCAGTCG CGGGCAGATT GACGCCATAG TCGAACATGC CATGAGTCGA CTGAGCATTG GCGGAAAATT GATCCTCTCT GCCATCACTT TAGACAGCGT CAGCGAGTTC TTTCAACTAT GTAAATCGAA GCAATATCAG TATGAAGTCA TGATGTTGCA AAGTTCAGTC TCGCAGCCAT TAGCGCATTA CCAGCGTTAT CAGGCTGAAA ATCCTATTCA CCTGTTTGTG ATCACTAAAG AAGGCAATAA CACATGA
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Protein sequence | MTGSITLIGI GDDGCVSLTS RAINAVAQTE LLAGATRHLE FFPQFCGEKL SFVSGLNGYL TQIVEAAKDK DICVLASGDP LFFGIGKRLL AMVAAVDAAI NVEVITSPSS VQLACAKALI PSDNVKVISL HGRAITGMVA RMQQGDHFAL LTDNDHNPVA IARHLLSYDE TLWRLVLCEH LGGSKERIRE FTVQELAATS TDDIESLNVL LLQRQGQAYW GGLATHCPDS AYQVLTPLNG LITKAITRAL VVARLGLTPC SVVWDIGSGS GSIAIEAAKQ AWNGHVYALE CNPQCFDVIG QNQKRHRVDN LTLVKSKAPL GLDELPAPDA VFVGGSRGQI DAIVEHAMSR LSIGGKLILS AITLDSVSEF FQLCKSKQYQ YEVMMLQSSV SQPLAHYQRY QAENPIHLFV ITKEGNNT
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