| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2068 |
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| Symbol | |
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| ID | 5614119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2505238 |
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| End bp | 2506677 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932965 |
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| Product | pyruvate kinase |
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| Protein accession | YP_001473805 |
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| Protein GI | 157375205 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0469] Pyruvate kinase |
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| TIGRFAM ID | [TIGR01064] pyruvate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000423476 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000129577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCCGCA GAACCAAAAT CGTAACAACT TTGGGTCCAG CTACCGATCG CGATGACAAC
CTACGCCGCA TTATCAAGGC CGGCGCTAAC GTTGTTCGTC TAAACTTCTC ACACGGCTCT
CCTGAAGACC ACCTTAAGCG TGCTACCGAT ACACGCAATA TAGCAAAAGA ACTTGGTGTT
CATGTTGCTA TCTTAGGTGA TCTACAGGGT CCTAAAATTC GTGTTTCTAC TTTCAAAGAC
AACAAAAAAG TTCAGCTAGA CCTAGGTCGA AGCTTTATCT TAGATGCTGA TCTTCAGAAA
GGTGAAGGCG ATGAGAACCA GGTTGGTATT GACTATAAAG AGTTACCGAA TGATGTAAGC
ATCGGTGATA TCCTTATGCT GGATGACGGT CGCGTACAAC TAAGAGTTGA AAGTGTAGAC
GGTAATAAAG TCCACACTAC AGTTACTGTT GCCGGACCTC TGTCTAACAA CAAGGGCATC
AACAAGCAAG GTGGTGGCTT ATCGGCTGCT GCATTGACTG AAAAAGATAA GCGTGACATC
GTCACTGCCG CTGAAATTCA GGTCGACTAC TTAGCCGTCT CTTTCCCTCG CAGTGGTGCA
GATCTTGACT ATGCACGTGA GCTTGCTCAA CAAGCGGGAA GCAATGCACT AATCGTTGCT
AAAGTAGAAA GAGCAGAAGC CGTTGCGACT GACGAAGCAA TGGATGATGT GATCCGTGCT
TCTGATGTTG TCATGGTTGC CCGTGGTGAC TTAGGTGTTG AAATCGGCGA CCCAGCGTTA
GTTGCTGTTC AGAAGAAACT GATCAGTCGC TCACGTCAAC TCAACAAGAG TGTCATCACT
GCAACGCAGA TGATGGAGTC TATGATAACA AGCCCGATGC CTACTCGTGC AGAAGTTATG
GACGTTGCAA ACGCAGTACT CGATGGTACT GACGCTGTAA TGCTTTCAGC CGAAACCGCT
GCCGGTGACT TCCCTGAAGA AACTGTACAG GCCATGTCAG GTGTTTGTCT TGGTGCTGAA
GAGCATCCTA GTGTACAAGT ATCTAAGCAC AGACTAGATG AAAGTTTTGT TACTGCTGAA
GAGACAATTG CACTTTCAAC TATGTATGCA GCTAACCACT TGAAAAGTGT TAAAGCGATT
GTTGCCTTGA CTGAATCTGG TGCTACACCA CAGTTAATGT CACGCATCAG TTCAGCACTG
CCTATCTTTG CTTTGTCTCG TCATGACGTG ACTCTGGCTA AAATGGCGCT TTACCGTGGT
GTTCAGCCTG TACATTTTGA TTCTACGCAG TTCGGTGCTG AAGAGCTTGC CTCAAAAGCA
TTAGAATCAC TATCTCAAGC GGGTTACCTG AAGAGTGGTG ATATGGTCTT GATGACTAAG
GGTGACACTA TGGAAACTAT CGGCGGAACA AATACTTGTA AAGTATTAAT CGTCGCTTAA
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| Protein sequence | MFRRTKIVTT LGPATDRDDN LRRIIKAGAN VVRLNFSHGS PEDHLKRATD TRNIAKELGV
HVAILGDLQG PKIRVSTFKD NKKVQLDLGR SFILDADLQK GEGDENQVGI DYKELPNDVS
IGDILMLDDG RVQLRVESVD GNKVHTTVTV AGPLSNNKGI NKQGGGLSAA ALTEKDKRDI
VTAAEIQVDY LAVSFPRSGA DLDYARELAQ QAGSNALIVA KVERAEAVAT DEAMDDVIRA
SDVVMVARGD LGVEIGDPAL VAVQKKLISR SRQLNKSVIT ATQMMESMIT SPMPTRAEVM
DVANAVLDGT DAVMLSAETA AGDFPEETVQ AMSGVCLGAE EHPSVQVSKH RLDESFVTAE
ETIALSTMYA ANHLKSVKAI VALTESGATP QLMSRISSAL PIFALSRHDV TLAKMALYRG
VQPVHFDSTQ FGAEELASKA LESLSQAGYL KSGDMVLMTK GDTMETIGGT NTCKVLIVA
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