Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_2056 |
Symbol | |
ID | 5612383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 2490380 |
End bp | 2490970 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640932953 |
Product | Smr protein/MutS2 |
Protein accession | YP_001473793 |
Protein GI | 157375193 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000826429 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.140995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGAATG ATGATGTTTC ATCCTTTCTG GACGAGATGG CAGGGGTTAA GCCTCTAAGT GGAAGTGAGC AAATCAGGCC TATCTGCAAC AGTGATATCT CGGCATCCCA ATTAGCCCGA AAAAAAGCGG CACAATTATC AGAAGCGTTA CTGCTGCTAA CTACAGATAT TAACCTTATC AACCCTGTAG AGCCCGAAGA GGTGATAAGT GTCTGTCGGG ACGGTGTTCA AACGCCTGTT TTCAAGCACC TGAGTGCAGG AAAATATACA TTTCTCTCGG AGTTGGACCT TCATGCTTTA AATATGCGTC AGGCAAGGGA GGCGTTATAT CACTATATCG AGGACAGATA CGAGAAAGGC GAGCGGTGCG TTCTGGTCAT TCACGGTAAA GGCTTTAAGA GTAAACCGAT AAATGCACTG ATTAAATCAT GTGTGGTCAA TTGGCTGGCG CACTTAGATA AAGTGTTAGC TTTTCATAGC GCCAAAAGAG AGCACGGAGG AACGGGCGCT TTATATGTGA TGTTGAGTAA GTCTGAAAAT AAACGTATCG AGTCGAGAGA GCAAAATCAT AAGGGTAGCG GTTTCAGATA G
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Protein sequence | MVNDDVSSFL DEMAGVKPLS GSEQIRPICN SDISASQLAR KKAAQLSEAL LLLTTDINLI NPVEPEEVIS VCRDGVQTPV FKHLSAGKYT FLSELDLHAL NMRQAREALY HYIEDRYEKG ERCVLVIHGK GFKSKPINAL IKSCVVNWLA HLDKVLAFHS AKREHGGTGA LYVMLSKSEN KRIESREQNH KGSGFR
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