| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2044 |
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| Symbol | |
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| ID | 5610785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2474543 |
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| End bp | 2475121 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932930 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_001473781 |
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| Protein GI | 157375181 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0115826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAT ATCTCCTGCT ATTGATCAGC ACTGTGTTGG TCAACAACTT TGTATTAGTC
AAATTCCTTG GTTTATGCCC TTTCATGGGA GTGTCCAGCA AGCTCGAATC AGCCATTGGG
ATGTCGATGG CCACGACGTT TGTCCTTACT CTCGCGTCCG TATTGAGCTA CTTGGTTAAC
CAATATCTGT TACTGCCTTT TGAGCTGGGC TACCTGAGAA CGATGAGCTT TATTTTAGTC
ATTGCCGTCG TTGTTCAATT TACCGAAATG CTTGTCCAAA AAACCAGTGC CTCTCTCTAC
AGGGCTCTGG GGATATACCT TCCTCTTATC ACAACTAACT GTGCCGTGCT CGGTGTTGCC
TTACTGAATA TCAGTGAGAA ACATAACTTT ATCGAGTCAG CTATCTATGG GTTTGGGGCT
GCTGTCGGTT TTTCTCTGGT GTTGATCCTA TTTTCGGCCA TGCGTGAGCG CCTTGCCGCA
GCCGATGTGC CTCTTCCGTT CAGAGGAGGA GCCATTGCGA TGATCACAGC GGGTCTGATG
TCTCTTGCAT TTATGGGTTT TACAGGATTG GTTAAATAA
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| Protein sequence | MSEYLLLLIS TVLVNNFVLV KFLGLCPFMG VSSKLESAIG MSMATTFVLT LASVLSYLVN
QYLLLPFELG YLRTMSFILV IAVVVQFTEM LVQKTSASLY RALGIYLPLI TTNCAVLGVA
LLNISEKHNF IESAIYGFGA AVGFSLVLIL FSAMRERLAA ADVPLPFRGG AIAMITAGLM
SLAFMGFTGL VK
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