| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_2017 |
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| Symbol | |
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| ID | 5613839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2441422 |
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| End bp | 2442186 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640932903 |
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| Product | thiazole biosynthesis family protein |
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| Protein accession | YP_001473754 |
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| Protein GI | 157375154 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.706865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAA TTGCAGAACA TGAGTTTAAC TCCAGATTGT TTACCGGTAC CGGAAAGTTT
TCATCGGCTA ACTTGATGCT GGAGGCGATC CAGGCTTCGC AATCCCAACT TGTGACTATG
GCGATGAAAC GGTTAGATCT TAGCAGTGGT AGCGATGAGA TCTTATTACC CTTACAGCAA
AGTGGCATCA AGCTACTTCC CAATACGTCG GGTGCAAGAA ATGCCAAAGA GGCAGTATTT
GCCGCAGAAT TAGCAAGAGA GGTACTGAAC ACCAATTGGG TCAAACTTGA GATCCACCCC
GACCCCAAAT ATCTGATGCC CGATCCAATT GAGACGTTAG CTGCCGCAAA GACTCTCTGT
GATAAAGGCT TCGTAGTCTT GCCTTATGTT CATGCCGATC CGGTTCTATG TCGTCGTCTC
GAGGAGGTGG GCTGCGCCGC CGTTATGCCA CTGGCGAGCC CCATAGGTTC AAATCAGGGC
TTAGCGACCG AAACCTTTCT CAAAATAATC ATCGAGCAAG CTAGTGTGCC TGTCGTGGTC
GATGCCGGGA TCGGTACGCC GTCTCAGGCG ACACATGCCA TGGAGTTAGG CGCCGATGCA
GTATTGGTCA ACACCGCTAT CGCCAGCAGT CGAGATCCCA TCGCCATGGC TCGCTGCTTT
TCTCAAGCGG TAGAAACCGG TAGAGCGGCG TATCGGGCGG GACTCGGCCA AGTCAGTGTT
CGCGCCGAGC ACACGAGTCC GTTAACGGGG TTCCTCAATG AATAA
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| Protein sequence | MLKIAEHEFN SRLFTGTGKF SSANLMLEAI QASQSQLVTM AMKRLDLSSG SDEILLPLQQ
SGIKLLPNTS GARNAKEAVF AAELAREVLN TNWVKLEIHP DPKYLMPDPI ETLAAAKTLC
DKGFVVLPYV HADPVLCRRL EEVGCAAVMP LASPIGSNQG LATETFLKII IEQASVPVVV
DAGIGTPSQA THAMELGADA VLVNTAIASS RDPIAMARCF SQAVETGRAA YRAGLGQVSV
RAEHTSPLTG FLNE
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