| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1994 |
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| Symbol | |
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| ID | 5613372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2410466 |
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| End bp | 2411782 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932878 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473731 |
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| Protein GI | 157375131 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03503] conserved hypothetical protein TIGR03503 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000845172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000203424 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTTAA TGAAGATCAA GAATAAACTT ATTGGCTCAC TTATAGCGCT AAGTATCGGC
TTTAGCACTA TAGCCGTTGC CGCTGTTGTG CCGTCAGATA AAGCCCATGA GCTCAAAAAT
CGTTTTCGAA TCGATCATAT GGTTGATAGC CTGACTTTAG TTATTCAACG CAAGTACGGC
AGCGGCCCCG TTGTTATCGT TTTACCCGAT GGTAGTAAAT GGTATGCCAG TCGCCATCCC
AAGCATGTCA AATGGGTTGA TGGTCTCAGT GGAGACATTG TGACTATCGA GAAGCCTATG
CCTGGTCCGT GGCAGTTACT CGGGCGCGTC GTGCAAGGCT CCACAATAAA GAAAATCTCA
AAGTTAGACA TCTCTGTCGA GCCTTTCCCA CAGCCTCTGT TTCAAGGGGA ACGCTTAAAA
GTCACGGCGC AGCTATTAGG CGATGAACAG CGCATTAGAA TGCCTGGGTT AGATTATCTG
GTCGAGTGGA CAGCTAAATT TGTCAGTGAC CATCAGGTCG GTGAAGAAAA TTTTGCTACG
GGAAATATTA TTGTAGGCTC CTATAAAGAT AATGGAGAAG GGTTAGATGA ACGTCCCGAT
GACGGCCTGT TCACCGGGAA AATAAATTTA ACTCAAGCCT GGGGTACTTA TGATCTTCAT
GTAAATGCTC GAAATAATAT TTTGTCTAGG GACTTTCATC ATAAGTTTGT ATTGTCTCCT
ATTCCCATAA GTGTCGATGT CATCGAACCT GAAGACCCAC TAAAAGACAG GTGGAAGTTG
TTCGTTAAGG TCAATGACGA GGCCGTGAGG TTAGACGAGA CACATTTAGA TTTTGAATTA
GTTGGACCGG CGGGACTGCA ACTTCCTATC ACCATCAATG GGCTTGAAGA AACAGAAAGT
GAGTTGCTAC TACCTGAAGT TGCAGAGTTT GGCAGCTACC GGATTAAAGG CGTCGCGGCA
ACGACCACAC TTAGCGGAAG AGAGATCTTA CTCAGTATGC CAGAGCGATT CTTCAATTTG
ATTGAGCCAC CGGAGCCGCC ACCAACAGCC GAAGAGCTAG CAGCCATCGC GGCGAAGAAA
GCGGCTATTG CCGAAAAGAA AGCCAAGGAT GACGCAGTCT TTTGGATAAT ATTAGTTAAT
TGTGGGTTAT TAGTCTTCGG TATTCTAGGT TTACTTGTCT GGCGTAAACG TCGCAACTTG
AAAGAGGCGT TAGCGGCAAC TCAGTTACGT TTAGACGAAG AGAAGGCAAA GCAGAAGGAG
ATTGGCCCGG CGTTGGATGA AATTGATTTA ACTATGCCGG AAGATCCCCC CTCATAA
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| Protein sequence | MTLMKIKNKL IGSLIALSIG FSTIAVAAVV PSDKAHELKN RFRIDHMVDS LTLVIQRKYG
SGPVVIVLPD GSKWYASRHP KHVKWVDGLS GDIVTIEKPM PGPWQLLGRV VQGSTIKKIS
KLDISVEPFP QPLFQGERLK VTAQLLGDEQ RIRMPGLDYL VEWTAKFVSD HQVGEENFAT
GNIIVGSYKD NGEGLDERPD DGLFTGKINL TQAWGTYDLH VNARNNILSR DFHHKFVLSP
IPISVDVIEP EDPLKDRWKL FVKVNDEAVR LDETHLDFEL VGPAGLQLPI TINGLEETES
ELLLPEVAEF GSYRIKGVAA TTTLSGREIL LSMPERFFNL IEPPEPPPTA EELAAIAAKK
AAIAEKKAKD DAVFWIILVN CGLLVFGILG LLVWRKRRNL KEALAATQLR LDEEKAKQKE
IGPALDEIDL TMPEDPPS
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