| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1982 |
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| Symbol | |
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| ID | 5612691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 2397180 |
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| End bp | 2397809 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932866 |
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| Product | putative sulfite oxidase subunit YedZ |
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| Protein accession | YP_001473719 |
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| Protein GI | 157375119 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2717] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.007094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.690265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTGA CGACAAAACA TCTTTTTTGG TTAAAGACAG TGATTCACCT TATCGCTATT
TTTCCGATTG GATATCTGAT TTTTCTTGTT ATGACGAATG GGGCGGGTGG CGACCCTGTT
CAGTACATCA TTCACTATAC CGGGATAGGT GCGTTAAATA CCTTGGTTGC CTTGTTAATG
GTGTCGCCTC TGGCGCGTAA GCTTAAACAG GGGATACTCA TTCAAACCCG CAGAATGTTG
GGTTTATATG TGTTTGCCTA TGCTTCGCTG CATGTCATGG CATTTGTCAG CCTGGACCTC
TTGTTCGAGT GGTCACTGTT TCTGCAAGAG GTGGTTAAGC GTCCTTATAT TGTGGTGGGG
ATGATCTGTT ATCTCATCTT GATTGCGCTT TCAATCACCT CGCTGAAATC ACTGAAACGC
AAAATGGGTA AGCGCTGGCA GCAACTGCAT AACCTGGTAT ACCTCTTAGC GCTATTAGTG
CCAGTTCATT TCTACTGGTC AGTTAAATCT GAAGTGATAG AACCCAGCAT TTATATACTC
GTTATCTGTT TTCTCTTGCT GCTGAGGCTG AGAATATCTG CCAAGTTATC TCAATCTCTC
TCCTGGTTGA AGCTCAGATT GAACATGTAA
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| Protein sequence | MRLTTKHLFW LKTVIHLIAI FPIGYLIFLV MTNGAGGDPV QYIIHYTGIG ALNTLVALLM
VSPLARKLKQ GILIQTRRML GLYVFAYASL HVMAFVSLDL LFEWSLFLQE VVKRPYIVVG
MICYLILIAL SITSLKSLKR KMGKRWQQLH NLVYLLALLV PVHFYWSVKS EVIEPSIYIL
VICFLLLLRL RISAKLSQSL SWLKLRLNM
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