| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1901 |
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| Symbol | |
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| ID | 5610824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2285145 |
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| End bp | 2285384 |
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| Gene Length | 240 bp |
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| Protein Length | 79 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932787 |
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| Product | hydrogenase assembly chaperone HypC/HupF |
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| Protein accession | YP_001473640 |
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| Protein GI | 157375040 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0298] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000307704 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTGTTTAT CTATTCCTTC TCAGGTCGTT GAGCTTCACG AAGAGGAGCA AAGCGTCACA
GTTGAAACCA TGGGCGTAAA GAGAAAAGTC AGCGCACACC TGATGCCTGA GCCCCTGGAA
ATTGGTGACT ATGTCTTGAT CCACATCGGA TTCGTCATGA ATAAAATCGA TAAAGCCGAT
GCCTTAGAGA GCATCGAGCT TTATAACGAA ATAGTCGAAA AAATGGCCGC GGCGGAGTAG
|
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| Protein sequence | MCLSIPSQVV ELHEEEQSVT VETMGVKRKV SAHLMPEPLE IGDYVLIHIG FVMNKIDKAD
ALESIELYNE IVEKMAAAE
|
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