| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1807 |
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| Symbol | |
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| ID | 5612717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2177214 |
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| End bp | 2178809 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932682 |
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| Product | putative ATP-binding component of ABC transporter |
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| Protein accession | YP_001473546 |
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| Protein GI | 157374946 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.451616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCT TACATGCTCA TCGAGTATCG TTTAAGTTAA ACACAGGCGA GAGACTGTTC
AGTGAACTCT CATTATCCAT CGATTCTAAA TTGACGGCTC TTGTCGGCCG CAATGGCGCA
GGAAAGTCTG TACTGGCTTC AATATTGGCG GGAGAATGCC AGCCAGATTT AGGCTCAGTC
TCTTGTCGCG CTAAGTTAGG CTACTTCAGG CAGCAAGGGC CAAGCGGGAA GAAACTGCAA
AGTGTCGCGC AATTTATGGA AGTTGAGCAT CTGCTACTGG CACTAAACAG AATAGAGCAA
GGCCAGGCCT CCTTAGAGGA TATCGACACC ATAGGCGATA ATTGGCATAT CAAAGAGACT
TTAGAGAGCC AGCTTAGTGC GATCAATTTA ACCCACTCTC TCCAACGTCC TTGCGCTCAA
TTAAGTGGTG GAGAGATGGC TAAGCTACGC CTGCAAAAAC TATTTAATTC AGATGCCGAA
CTGCTCATCT TAGATGAACC CTCAAACCAT CTGGATAACC AGGGAAAAAG CTGGCTCATT
GAGCAGATAC ACAAATCACG CGCACGGATA CTCATCGTCA GCCATGACCG TGAACTGCTT
AAGCATGTTG AAATAATATT TGAGTTAAAT ACCCTAGGCT TAACTCAATA CCGTGGTAAT
TACACCTGTT ATGAGGCCCA AAAGCGAGCC CAGTTAGCCG CCATAGACCG AAAACTTACT
AACGAAAAAC TTAAGCATAA GCAGATCAGG CAGCAAACTC AAACGAGTAG TGAAAAAGCA
CAAAAGAGAG CCGCAAGTGG TACAAGATTA AGAAGGTCAG GTAGTCAGGC TAAGGTGTTA
CTCAATAGCA TGCGTGACAG AGCCGAGCAA TCCGCCTCCG CCAGAGCGAC ACAAAGGGAT
AATCAACTCA GTCTGAATGC CACAACACTA GCTCAATTGA CTCAACAGAG AGAAACGTTA
AAACCCCAGG CGTTACACAT GCAGTCGGTC ATAGAGAAGC AACATCTCCA GCTCCATGTC
GAGGAGCTAA TCCTGCCCTA TAGAGGTGTA AACCCATTAA ACTTCTTATT GTCTACAGGG
GACAAACTCC ACCTGTCAGG TAATAATGGC ACGGGGAAAT CAACCCTGAT GAAGGTTCTA
TTAGGCGAGC TTGCACCTGC AAGAGGTCGG GTTTACCGAA ACGCCCCCCT CTTTTATCTG
GATCAATATT TTGACCTGCT CAAACCTGAG ATATCCCTGT TAGAAAATAT CAGCCATTAC
TGCCCCACTA TAGAAGAAAC CCGGTCACGA ACCCTACTGG CAGGAATTGG ATTCAGGGGT
CAGAGTGTTC ATCGAAATGT GGCTCTTCTT AGTGGCGGAG AAAAGATGAA GCTCTGTATC
TTGATTGTCA CTCATCAAAC ACCTCTTCCT CTACTCTTGC TGGATGAACC CGACAATCAT
TTGGATATCG CTTCGAAACA GTTACTCGCT ACCGCGCTTA ACCAGTACCC GGGAAGCTTT
ATATTGGTCA GTCACGATAA AGAGTTTATC AAAGAGTCTG GTGTCACCGA TACTCTAGTA
CTCTCCACTT ACGGCCAATC CGTACATGGT GAATAA
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| Protein sequence | MPILHAHRVS FKLNTGERLF SELSLSIDSK LTALVGRNGA GKSVLASILA GECQPDLGSV
SCRAKLGYFR QQGPSGKKLQ SVAQFMEVEH LLLALNRIEQ GQASLEDIDT IGDNWHIKET
LESQLSAINL THSLQRPCAQ LSGGEMAKLR LQKLFNSDAE LLILDEPSNH LDNQGKSWLI
EQIHKSRARI LIVSHDRELL KHVEIIFELN TLGLTQYRGN YTCYEAQKRA QLAAIDRKLT
NEKLKHKQIR QQTQTSSEKA QKRAASGTRL RRSGSQAKVL LNSMRDRAEQ SASARATQRD
NQLSLNATTL AQLTQQRETL KPQALHMQSV IEKQHLQLHV EELILPYRGV NPLNFLLSTG
DKLHLSGNNG TGKSTLMKVL LGELAPARGR VYRNAPLFYL DQYFDLLKPE ISLLENISHY
CPTIEETRSR TLLAGIGFRG QSVHRNVALL SGGEKMKLCI LIVTHQTPLP LLLLDEPDNH
LDIASKQLLA TALNQYPGSF ILVSHDKEFI KESGVTDTLV LSTYGQSVHG E
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