| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1771 |
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| Symbol | |
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| ID | 5612229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2128641 |
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| End bp | 2130188 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640932641 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_001473510 |
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| Protein GI | 157374910 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTAAAA ATATCATCCT CCTGTTACCT CTTTTCTTCT TATTTTCCTG TACCAGCCTG
CCGGACAATA CCAGCAGTAA AAGTTACGCG ATAAGTAAAT CTCAAGAAAG TCGATTAACA
GTGGAGCTTG ATGAGAAACG TAAGCAGCTC GGTTTGAACA ATGATGAGAC GTTAATGATC
TTGCTAGAAG ATGGTGTTGA TGCTTTTGTA GCTCGAGTTT CCCTGATTAA TGCGGCGCAA
AAGAGCGTCG ATCTGCAATA TTATCAATAT CACTCTGACT TAAGCGGAAG ACTATTAACG
GCAGCCTTAT GGCGGGCTGC AGAGCGAGGG GTGCGCATAC GTTTACTTGT AGATGATATG
GATTTAGCCG GCAAGGATAT TGATATAGCT AAAGTAAATT CTCACCCAAA TTTCGAAGTG
CGCATTTTCA ATCCGTTTCT ACGTGACAAA AAGCGCACTC GGCAATTAAT TACAGGCTTT
GGTGCAGTAA CACGTCGAAT GCACAACAAA ACATTCACGG TAGACAGCAG CATATCCATT
TTGGGCGGGC GTAATGTAGG TGACCAATAT TATGGCGCGC ACTCAGATGT AGCTTTTGGA
GATTTAGACA TTGCTTTTAC AGGCGGCGTT GTACAAGAGG TTCAAACTTC TTTTGACTTA
TATTGGAACA GTGAAATCAC CTACGGCATC AATTTATTAA ATGATCACCA ACCATCAAAA
AATGACGTGC ATGAAGTCAG TCAAATTTTA GAGTCCTTTA TAGAGGAGCA GAAAAACTCT
CAATATGCAC GCGCACTACG TAAAAACGAC TTATTAAGTT TAGTAAAAAA AAATAAAGTA
AATGAATATA TAGGTAATGC AGAGGTCTTA TATGATGATC CATTAAAAAT TGTCTCTTCA
CGTGACAAAA CTGAATACCA CTTAACTCCC AAATTACGCC CTTACGTGGA AAATGCAAAA
GATGAAATCG TAATCGTTTC ACCTTACTTC GTACCTGGGG ATGAAGGTGT TGCACTATTT
GGCGATCTGG TAAAAAAAGG CGTAAAAGTT AGAGTTTTAA CCAACTCGAT GAAATCTAAT
GATGTCACCA TAGTGCACTC TGGATATTCA AAGTATCGAC AAGAATTATT ATCGCTTGGT
GTGGAATTAT ATGAAGTAGA CAGTGCCCGT ATAGGTATAT TAAAAAAATA TACAGATGAA
GCAGATTCTT CAACCGCATC GAAACTCACC TTACATGCAA AGTATTTTGT CATTGACCGC
AAAATTACTT TTATTGGGTC AATGAATCTC GACCCTCGTT CACGCAGTGA AAACACAGAA
ATTGGTGTAA TTGCAGAGTC CAAAAAATTA GGTGCTTTTA TTGTTGAAGA TTTTGACAGT
ATCGTTAAAG ATGGTGCTTT TACACTATCA CTTAAAGAAG GTGAGATTAT CTGGACTCAA
AAGGTTGGAG ACGAAATAAA GACCTATGAC AATGATCCTT ACAGCAGTTG GTGGGATCGC
TTCAAAAACG GTTTATTGCA ATGGTTACCT GTCGAGTCAC AACTTTAA
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| Protein sequence | MLKNIILLLP LFFLFSCTSL PDNTSSKSYA ISKSQESRLT VELDEKRKQL GLNNDETLMI
LLEDGVDAFV ARVSLINAAQ KSVDLQYYQY HSDLSGRLLT AALWRAAERG VRIRLLVDDM
DLAGKDIDIA KVNSHPNFEV RIFNPFLRDK KRTRQLITGF GAVTRRMHNK TFTVDSSISI
LGGRNVGDQY YGAHSDVAFG DLDIAFTGGV VQEVQTSFDL YWNSEITYGI NLLNDHQPSK
NDVHEVSQIL ESFIEEQKNS QYARALRKND LLSLVKKNKV NEYIGNAEVL YDDPLKIVSS
RDKTEYHLTP KLRPYVENAK DEIVIVSPYF VPGDEGVALF GDLVKKGVKV RVLTNSMKSN
DVTIVHSGYS KYRQELLSLG VELYEVDSAR IGILKKYTDE ADSSTASKLT LHAKYFVIDR
KITFIGSMNL DPRSRSENTE IGVIAESKKL GAFIVEDFDS IVKDGAFTLS LKEGEIIWTQ
KVGDEIKTYD NDPYSSWWDR FKNGLLQWLP VESQL
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