| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1758 |
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| Symbol | |
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| ID | 5610649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 2112880 |
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| End bp | 2113944 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932628 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_001473497 |
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| Protein GI | 157374897 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00909742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTACG CCACTATCAC AGGTTGGGGA AAATGTGTTC CGCCAGCAAC CCTGACTAAC
CACGACCTTT CCACTTTTAT TGAAACATCT GATGAATGGA TCAAACCACG CACAGGCATC
AGCCAGCGTC ACATCAGCCA TGTTGATACT TCTGAGCTCG CATCTGTAGC GGCGCAGCGT
GCCTTGGCCG CAGCCGGAAT AGATGGCAGC GAGTTGGATA TGATCATCCT TGCTACCGCA
AGCCCGGATA CCTTGATCCC AAATATTGCC TCTACGGTAC AGGCCAATGT TGGCGCAACA
TGCGCTGCAT TCGATATCAA CGCCGCCTGT AGTGGTTTCT TATATGGACT CGGTCTGGGT
AGTGCTCAGA TTAAGAGTGG CCAATGTAAA AAGGTTCTCG TTATCGGTGC CGAGCGCCTC
TCTTTCTATC TCGATTGGTC GCGTCGTGAA ACTGCCGTAC TGTTCGGTGA TGGCGCGGGT
GCCGTTGTGC TTGAGGCGAC AGACGAAGCT ATCGGCATTT TAGGCTACGA GCTTAACAAT
GACCCTGCCG GTCGCGATAT CCTCAAAGCA GGTTTCGGTA CTGCAATGGA CAGATTCAAT
GCCGCATCAT TAGACTTCTA TATCGAGTTT AACGGTCAGG AGATCTTTAA ACGCGCCATC
GCAGGCATGG GTAAGCTGAG TAAGAAAGTC CTCGAGAAGT GTGATACTTC GATAGATGAT
ATCGATTGGG TTATTCCTCA TCAGGCTAAC GAGCGTATTA TCGATACCCT TATCAGCCGT
ATGAAGATCC CGAAAGAGAA AGCGATTGTG AACATTGCCA ATTACGGCAA TACATCGGCA
GCCACGATCC CTATCGCCAT CTGTGATGCG CTTGAGCAAG GTAAGATTAA ACCAGGTCAG
ACGATACTCT CATGTGCATT TGGCGCGGGG CTTACCTCGG CTGCGGCATT GATTAAGTGG
GGCGATAGAG TCACTCCAAT TAATGAAAGC GATGCTGAGC TTCCTCCATG CGATAAAACC
GGCATAGAGT TAGTCAGTAA GGCTGTGAAG CACTTCTGCG GCTAA
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| Protein sequence | MQYATITGWG KCVPPATLTN HDLSTFIETS DEWIKPRTGI SQRHISHVDT SELASVAAQR
ALAAAGIDGS ELDMIILATA SPDTLIPNIA STVQANVGAT CAAFDINAAC SGFLYGLGLG
SAQIKSGQCK KVLVIGAERL SFYLDWSRRE TAVLFGDGAG AVVLEATDEA IGILGYELNN
DPAGRDILKA GFGTAMDRFN AASLDFYIEF NGQEIFKRAI AGMGKLSKKV LEKCDTSIDD
IDWVIPHQAN ERIIDTLISR MKIPKEKAIV NIANYGNTSA ATIPIAICDA LEQGKIKPGQ
TILSCAFGAG LTSAAALIKW GDRVTPINES DAELPPCDKT GIELVSKAVK HFCG
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