| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1668 |
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| Symbol | |
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| ID | 5612135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1999811 |
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| End bp | 2000617 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932538 |
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| Product | exonuclease III |
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| Protein accession | YP_001473407 |
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| Protein GI | 157374807 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0708] Exonuclease III |
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| TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000408122 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCG TCTCTTTTAA TATCAATGGT ATTCGCGCCA GATTACACCA ACTACAGGCG
CTGATTGATA GCCACCAGCC AGATGTGATC GGCTTACAGG AAACGAAGGC CCATGACGAT
GTATTCCCTG TGGCAGATGT CGAAGCCATG GGGTACAAGG TGCACTATCA TGGTGGCAAG
GCCCATTACG GTGTCGCCAT GTTATCTAAG CTTGAGCCTG TAAAAGTACA AAAAGGGTTT
CCAACCGATG ATGACGAGGC GCAACGCCGC ATGATCATGG GCACATTCAC CCAAGAAAAT
GGCCGACCGC TGACGATATT AAATGGCTAC TTCCCTCAAG GCGATAATAT CAGCCATGAG
ACCAAGTACC CGGCTAAGCG CAAGTTCTAT AAAGACCTGA TGGTGTATCT TAACGAGCAC
CACACCCCGG ATGAAGATAT CGCTATCATA GGTGACATCA ACATCTCACC GGTAGATCTC
GATATCGGCA TCGGCGCCCC TAATGCCAAA CGCTGGCTAA AAACCGGCAA GTGCAGTTTT
CAACCCGAAG AGCGGGAGTG GCTGAAGACA TTGATGGACT GGGGCCTGGT AGATACCTTC
CGTGAGCTTC ACCCCGAGCG CAGCGAGCGC TACTCCTGGT TCGATTACCG CAGCAAAGGC
TTCGTTGATA ACCGTGGACT ACGCATCGAC GTCGTGTTAG CGACTAAGTC ATTGGCAGAA
CGTCTGGTCG AGTCAGATGT AGATTACGAG CTTAGAGGCA TAGAAAAGCC TTCCGACCAT
GCCCCGATTT GGAGCACGTT CAAGTAA
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| Protein sequence | MKIVSFNING IRARLHQLQA LIDSHQPDVI GLQETKAHDD VFPVADVEAM GYKVHYHGGK
AHYGVAMLSK LEPVKVQKGF PTDDDEAQRR MIMGTFTQEN GRPLTILNGY FPQGDNISHE
TKYPAKRKFY KDLMVYLNEH HTPDEDIAII GDINISPVDL DIGIGAPNAK RWLKTGKCSF
QPEEREWLKT LMDWGLVDTF RELHPERSER YSWFDYRSKG FVDNRGLRID VVLATKSLAE
RLVESDVDYE LRGIEKPSDH APIWSTFK
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