| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1654 |
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| Symbol | |
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| ID | 5610952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1981086 |
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| End bp | 1981706 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932524 |
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| Product | sporulation domain-containing protein |
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| Protein accession | YP_001473393 |
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| Protein GI | 157374793 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00276459 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTAGTC ATTTTCAGAA TCGTCTCGTT GGTATCATAG TGCTCGTAGC CTTAGGTGTC
ATTTTTCTGC CCGATATTTT AGATGGTAAA AAAGAGCACC AAGTGGAGCA ATTCTCAGAG
ATCCCACTCA GGCCTGAGGT TGAATCAGCC TCCCTTCCCG ATGAAGCCTT AGTGGCGTTA
GACCTGAGTG AAAAAGCAAA AGCATTTGAG TCATCAAGTG TTGAGTCTGA CTCAGCGGCA
CCTGCCATCG AACCTGCTAC AGGCGCGGTA AGTGCGGACA AACGTGCCGA GCCACAGGCT
GAATCTAAAG TAGTGGCAAA AACAGAGTCA AAATCCATTG TAAAAGCAGA GAAAAAACCT
ACCATTAAAC CTTCATCAGC CTATACCTTG CAGCTGGGTA GCTTTAATAA TGCGGCTAAT
GTTAGAGGGC TGGTAAAGCA GTTAAGAGGG AAGGGCTTTA ATGCCTATAC ACTTCCTGTA
ACGCCGATAG ATGGCAAGCT CACTAAGGTG TTCGTTGGAC CTGAACTCTC GAAATCAAAA
TTGCAGTCTC TTCAATCGGG TATTGAAAAG CTGACAAAAT TGAAAGGCCG TATCGTCGCC
TACGAACCAA CGGCTTCTTA A
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| Protein sequence | MSSHFQNRLV GIIVLVALGV IFLPDILDGK KEHQVEQFSE IPLRPEVESA SLPDEALVAL
DLSEKAKAFE SSSVESDSAA PAIEPATGAV SADKRAEPQA ESKVVAKTES KSIVKAEKKP
TIKPSSAYTL QLGSFNNAAN VRGLVKQLRG KGFNAYTLPV TPIDGKLTKV FVGPELSKSK
LQSLQSGIEK LTKLKGRIVA YEPTAS
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