| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1574 |
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| Symbol | |
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| ID | 5610852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1880430 |
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| End bp | 1880834 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932444 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001473313 |
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| Protein GI | 157374713 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0927503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0158805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTA GAAAGCATTC TAGCGTAGAA GAGGAAGCTG AGATTGATAT GACACCGATG
CTCGACATCG TGTTTATCAT GCTTATCTTC TTCATTGTAA CAACATCGTT TGTTAAACCA
TCGGGTCTTG ATTATAACAA GCCTGAAGCG TCTCAAGCGA CGAAGAAGCC TTCAGCTAAC
ATCTTCATTG GTGTGAGCAA GACTGGCGTC ATCATGATGG AGAATCGTCA GGTTGATATC
GAGCGTGTGA CAGCAAACGT AGAACGTATG CTTGCCGAAG CACCAGAAGC TGCTGTACTT
ATTCAGGCCG ACCAGGAAGC GAAACATGGC TTAGTGGTTA AGGTTTTGGA TAACGTTAAA
GCTGCGGGTA TTGATAAGAT CTCTGTATCG GCGGGGAATG ACTAA
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| Protein sequence | MARRKHSSVE EEAEIDMTPM LDIVFIMLIF FIVTTSFVKP SGLDYNKPEA SQATKKPSAN
IFIGVSKTGV IMMENRQVDI ERVTANVERM LAEAPEAAVL IQADQEAKHG LVVKVLDNVK
AAGIDKISVS AGND
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