| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1564 |
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| Symbol | |
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| ID | 5612861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1865131 |
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| End bp | 1865799 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932434 |
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| Product | primosomal replication protein N'', putative |
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| Protein accession | YP_001473303 |
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| Protein GI | 157374703 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.857042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000269133 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGAATACAA ATGAACTACT CAAACGATTA AGAGTCCAAC ATAAACAATT AGAACAGGAA
GTGCTTCAAC ACGACGCTTT ACTGCCCAAA GGCCAGAGAC GGTTACTTCA GGACACTGAA
CGCTTTAACG ATGAGCTTTT CATTCAAACC GGTGCAGAAC TTAAGCCTTG TATTGAGCAG
ATAAATAAGA GTATTCAACA GTTAGAAAAG TTACTCAGAA ATAAGTTGTC GGCAAGCACT
ATCGCAGTAA GTTGTGAGCG TATACAAGAT AGGTTCACTG CGGTAAGAAG AGCCTTAAAT
ACGACCACGC TTGGGGTCAA ATCGGCTGAA CAACAAAAAA CCTCACGTAT CGCACAAGCT
CGCAGTCGCC GCAGGAAAAC CCATAATGAC AGTGGCTTCA ACTGGATTGC TGCAGGCGTG
ATGCAGAACA GCCATCAACT CTATGAAGAA CTCAATAAAC ACCATAATTG GGTGCAGAAA
TTTGAGCAGA AAATTGAAAG TTTGCAATCT GAACTCGAAA ACTGTCATAG TGCTGACAAA
ATCAAAATGC AAAATGAAAT CCTTTTAGTT CATCGACGTT TAGGTAAATG CCGACAAGCT
ATAAGCTATA TAGAAGAGCG TATTCAGGCG TTTGAACGCC CTTATAGTCA AACCAATAGA
AGATACTAG
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| Protein sequence | MNTNELLKRL RVQHKQLEQE VLQHDALLPK GQRRLLQDTE RFNDELFIQT GAELKPCIEQ
INKSIQQLEK LLRNKLSAST IAVSCERIQD RFTAVRRALN TTTLGVKSAE QQKTSRIAQA
RSRRRKTHND SGFNWIAAGV MQNSHQLYEE LNKHHNWVQK FEQKIESLQS ELENCHSADK
IKMQNEILLV HRRLGKCRQA ISYIEERIQA FERPYSQTNR RY
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