| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1492 |
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| Symbol | |
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| ID | 5613003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1772432 |
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| End bp | 1773040 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932358 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473231 |
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| Protein GI | 157374631 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3310] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0122301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGC CAGAGCTGGA CCAAGAGAAG AATAAAATGA GAGACCAAGA GCAGGACACT
GAACTTAAAG CCATAGCCCA GCACACGCAA AACTGGGTCG AACGTGTGAT CATGAAATAC
AACATCTGCC CTTTCGCTCG CCGTGAAGTT GAGCGTCGCA GCATTCGTTA TGCCGTTATC
GATGAGGCTA AGATGCACAA TGTGCTCGAG GCCTTGATCA CAGAATGTCA GCACTTGGAT
GCTCACCCCG AGATTGAAAC TACCCTATTT ATCGTCCCCC GAGGGTTCGA AGGGTTTTAC
CCCTATCTGG ATCTCGTCGA TATCTCTAAT GATCTGCTTA TCGAGCAAGG CTATGAGGGG
GTATATCAAC TCGCGAGTTT CCACCCCGAT TACTGTTTCG ATGGTGAAGC TATGGATGAC
CCATCAAACT ACACTAACCG TTCGCCATAC CCGACCATGC ATATCATACG CGAAACCAGC
ATGGAGCAGG CTCTGGCAAA TTATGATGAT CCGGAATCGA TTCCGGAACG CAACATCGAG
TTCTCCCAGA AGAAAGGCTG TGATTTTTTC GCGAAATTAT TGTCTGGTTG CATGGGAAAA
AAGAGGTAG
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| Protein sequence | MTQPELDQEK NKMRDQEQDT ELKAIAQHTQ NWVERVIMKY NICPFARREV ERRSIRYAVI
DEAKMHNVLE ALITECQHLD AHPEIETTLF IVPRGFEGFY PYLDLVDISN DLLIEQGYEG
VYQLASFHPD YCFDGEAMDD PSNYTNRSPY PTMHIIRETS MEQALANYDD PESIPERNIE
FSQKKGCDFF AKLLSGCMGK KR
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