| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1447 |
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| Symbol | |
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| ID | 5610945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1716289 |
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| End bp | 1717854 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932313 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001473186 |
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| Protein GI | 157374586 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0476747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTT TAAGTTATGC CGATTCGGCA CTTTCATTGC TACCTCCTGT GGTTGCGATT
TTGCTGGCGA TAGTTACTCG TCGGGTTTTA CTCTCTTTAG GGATAGGAAT TTTACTGGGT
GTGGTATTGA TCACCGACTT TTCGGCGGTG AGTTCCGGTC AGTATCTGGG TGAGCAGGTT
GTAGGGCTCT TCTGGGACGA TGGCAGCATC AATAGCTGGA ACATCTATCT GTTAGGCTTC
CTTATTTTAC TGGGCATGAT CACGGCGCTT ATCACGGTCA GTGGCGCAGC TAAAGCCTTC
GCCGATTGGG CTCGCACTAA GATCAGAAAT AAACGCGATG CAAAATTACT GACCATGTTC
TTAGGTTGCG TCATATTTAT CGACGACTAC TTTAATAGCC TGGTCGTGGG TAGTGTTGCC
AGACCCTTAA CGGACAGGTA TTACATCTCA CGCAGTAAGT TAGCTTATCT GCTTGATTCT
ACTGCCGCAC CGATTTGTGT TATCTCACCG GTTTCCAGCT GGGGTGCCTA TATCATAGCG
CTGATCGGCG GTATCTTAAC GGCGCATGGT TTTACCGATT CCGGACATCT GAGTGTGTTT
ATCCAGATGA TCCCGATGAA CTTCTATGCC ATCTTCGCTC TTTTATTGCT GCTTTGTGTC
GCCTTCATGG GGCTCGATAT CGGTCCTATG CGCCAACATG AGCTCAATGC GCAAAAAGGT
AACCTTTATG ATGAAGCGAA AGGGTTACCA CCAGGGGCCA ACTCGGATCT ACCCGAGGCC
GATAATGGAA AAATCTTAGG TCTGTTCCTG CCTATTACCG TGCTGGTGTT TGCGACTTTT
TACTTTATGG TCAGCAGCGG TGGCGATGCA TTAGCAGCCA AGGGGCTGGA GTTTACTCTT
CTGGGCGCAT TTGAAAATAC AGATGTTGCA TCTTCACTAT TTTTCGGTGC TGCAATCGGT
TTCGCATCTA CACTTGCATT AGTGCTTTTC CAGGGGCTGA ATAAGTCATA TATCCTTCAG
GGTATGGTTG CCGGCGCACG CTCTATGTTG CCCGCTATCT ACATTCTTCT TTTTGCCTGG
ACGATTGCCG GGGTGATTGG CCAGCTCGAA ACGGGTAAGT ATATGGCAAG CTTAGCGACG
GGTAATATTC CCTTTGCACT GCTGCCTGCC GTGTTATTTG TGCTTGCCGG ACTGACTGCG
TTTTCGACCG GAACGAGTTG GGGAACGTTT GGTATCATGT TGCCGATTGC CGCTGATATG
GCGATGGGGA CACATACCAA TATGATGTTA CCTATGTTGG CATCGGTACT CGCCGGGGCG
GTATTCGGAG ATCACTGTTC ACCTATCTCA GATACCACCA TTCTCTCATC GACAGGGGCG
AATTGTCACC ATATCGACCA TGTGATCACT CAGTTGCCTT ATGCCTTGAT TGTTGCGGTG
ATAAGTTTAG CCGGTTACAC AGTACTGGGT TTCACCGAGT CTTTAGCCGC AGGTTTCGCT
ACCTGTAGTA TCTTGTTTGT CATCTCGGTT ATAGTGCTTA AGATTAAAGT GAACAGGAGA
GCCTGA
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| Protein sequence | MTTLSYADSA LSLLPPVVAI LLAIVTRRVL LSLGIGILLG VVLITDFSAV SSGQYLGEQV
VGLFWDDGSI NSWNIYLLGF LILLGMITAL ITVSGAAKAF ADWARTKIRN KRDAKLLTMF
LGCVIFIDDY FNSLVVGSVA RPLTDRYYIS RSKLAYLLDS TAAPICVISP VSSWGAYIIA
LIGGILTAHG FTDSGHLSVF IQMIPMNFYA IFALLLLLCV AFMGLDIGPM RQHELNAQKG
NLYDEAKGLP PGANSDLPEA DNGKILGLFL PITVLVFATF YFMVSSGGDA LAAKGLEFTL
LGAFENTDVA SSLFFGAAIG FASTLALVLF QGLNKSYILQ GMVAGARSML PAIYILLFAW
TIAGVIGQLE TGKYMASLAT GNIPFALLPA VLFVLAGLTA FSTGTSWGTF GIMLPIAADM
AMGTHTNMML PMLASVLAGA VFGDHCSPIS DTTILSSTGA NCHHIDHVIT QLPYALIVAV
ISLAGYTVLG FTESLAAGFA TCSILFVISV IVLKIKVNRR A
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