Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1445 |
Symbol | |
ID | 5610943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1714159 |
End bp | 1714908 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640932311 |
Product | electron transfer flavoprotein beta-subunit |
Protein accession | YP_001473184 |
Protein GI | 157374584 |
COG category | [C] Energy production and conversion |
COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0968162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAT TGGTGCCAGT TAAGCGCGTC GTTGATGCTA ATGTAAAAGT CAGGGTTAAT GCTGACAATA CAGGTGTCGA TACCGCAAAT TTGAAGATGG CGATAAACCC TTTCTGTGAA ATTGCTGTAG AGGAAGCCGT ACGCTTAAAG GAGGCCGGAG TGGCTTCTGA AGTTGTTGTG GTTACTGTGG GCCCTAAAGC GGCTCAAGAG CAGTTACGTA CCGCTATGGC TTTAGGTGCA GACCGAGGCG TTCATATTGA AACGGATGAG GAGTTGGTGC CTCTGTCGAT AGCAAAATTA CTTAACGCTG TGCAGAGTAG AGAAGAAGCA CAACTTATTA TCTTAGGTAA GCAATCTATC GATGGTGATA ATAACCAAAC TGGTCAGATG TTGGCAGCCT TAGGCAAGAT GCCCCAAGCT ACGTTTGCTT CAGAAGTTAA GGTTGAGGGA GGTCAGTTAG CGATCACCCG TGAGATAGAC GGTGGATTGC AAAGCATTAC TCTGCCGCTT CCAGCCGTCG TTACTGCCGA TCTGCGTTTG AATGAACCGC GTTATGCCAA GCTTCCTAAT ATAATGAAAG CCAAACGTAA GCCGTTAGAT ACCCTCTCTA TTGATGACTT AGGGGTAAGC CTGAAGTCTC ATCAAAAAGT ATTGAAAGTG ACACCACCTG CCGAGCGTAA AGGTGGTGTG ATGCTTGCGT CTGTTGCAGA GCTTGTTGAA AAGCTGAAAA ATGAAGCGAA GGTGATCTAA
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Protein sequence | MKVLVPVKRV VDANVKVRVN ADNTGVDTAN LKMAINPFCE IAVEEAVRLK EAGVASEVVV VTVGPKAAQE QLRTAMALGA DRGVHIETDE ELVPLSIAKL LNAVQSREEA QLIILGKQSI DGDNNQTGQM LAALGKMPQA TFASEVKVEG GQLAITREID GGLQSITLPL PAVVTADLRL NEPRYAKLPN IMKAKRKPLD TLSIDDLGVS LKSHQKVLKV TPPAERKGGV MLASVAELVE KLKNEAKVI
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