| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1427 |
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| Symbol | |
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| ID | 5610289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1690454 |
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| End bp | 1692199 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932293 |
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| Product | 5'-nucleotidase |
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| Protein accession | YP_001473166 |
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| Protein GI | 157374566 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.232685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACA GATACACGCT TAAGCTCGCC CATATCAACG ACACACACTC CCATTTCGAT
TCGAGTCGGG TGCATTTTTC TGTCGATACC CAGGGAAAGT CTTATGACAT CTATAGCCAC
AGTGGCGGCT ACGCAAGAAT TCAATATCAG CTAACAAAGG CAAGAGAGGA AGCGGCATCG
GCCGGGCAAG AGTTTCTCTT TCTTCATGCC GGTGATAGCT TTCAAGGCAC TCTCTATTTT
AACCATTTTA AGGGAGTGGC CAACGCACAC CTGCTCAATC TGCTACAACC CGATGCTATG
GTGCTGGGCA ACCATGAAGT CGATGATGGC AGTGCACCTA TCTTAGCGTT TCTTAACGAT
ATATCATTTC CGCTGCTGGC CGGAAATATG GATATGAGCC AGGAAGCGTC AGATAAGCCC
TCCCCTATCA AAGGACATAA GCGGCTATTG GATTATGATG ATGCCAACGG CAGAGCAAAA
GTTCTGATTA AACCGCTAAA AGATAAGCAA GTTGCCATTA TTGGGATCAC TTTGGATCAG
ATGGCCGAGA TAGCGCGTCC CGATCCCGAC ATGATTTTTA TCAATGCCAT CGAAACGACT
CGAAATACAG TAGCGCATCT CAAGACACAA GGCATAGACC ATATTCTGGT CCTTAGTCAC
CTCGGATTCA ATCAGGATAA GATTTTAGCC GAGCAGGTTG ACGGTATCAG CCTTATCGTT
GGCGGCCACA CACATACATT GCAAGGTGAG TTTAAAGCCT TAGGTCTAAG CTCGACTTCC
TATGGAGTCA GAGTCAATAA TACAGCCATT CTACATGCCG GAAAGCACGC CGAAACAATT
GGTATTGCGG ACATAGAATT CAGTGAGAGC GGACAGGTTA TCTCACTCGA TGGTCATAAC
TACTTCATGC TCGATGATCA GTTTATTCTC GAATCTAAGC ACGGCATTAC ACCTTCAGAT
TACGATGCGA TCAGAGCCTA CCTGAGCAGT CATCCAGGGA TCCGTGGGGA CAAAGAGGAT
GCTTTGGTCA CACAAGTGAT CAACGCTCAA TACCGCCCAG CCATTGAAGC ACTCGAGAAA
CAGGTGCTGG GCTTTATTCC CCGAAACCTG GTTCATACCC GGTTACCCAG TAAATCCCTT
CCACATGGAA GTGAAATAGC CCCTTTGGTG TGTAAGAGTA TCTATCATGA AGCGAAACTC
ATGTATCCCA GAGTCGATTT TGCCCTTCAC AATGCCGGGG GCGTTCGACA GTCTCTTAAT
AAAGGGGAAC TCACAGTTGC CGATGTTGCC GGGCGTCTGC TGCCATTCGA GCTCTCCCTG
GTTAAATATC AGATAAGAGG GCAACACCTA TATGAGGCAA TTGAATCAGC AATTAACTCT
GCAACCAATA ACAGCGTGAC TGGCACGGGG GCAGGCAGCT TTCCCTACAC TTACGGTTTA
AAGTATTTTT ATGACGGCCG TAAGCCCCAG GGGCAGCGCA TTTTGTCACT CGAAGTATTA
CGCAGTGACG GTGCAGCAGA CGAGCCTGAG GTGTGGGAGA GTGTCGACAG AGAGCAACAC
TACTTTGGTG TGTCATCGGC CTACACAGCT TCGGGAAAAG AGGGATATTA TCCACTGCTC
CAAGCCTGCT GGCAGCAAGC GATTGAGGGA CTCACTCTCC CCTCAGCTTT TATTCGCTTC
ATGAGCCATG AGCAGTCACT CAAGCAAGAT ATCTTGCCCC AAATCGAATA TATCAGCCAC
ATCTAG
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| Protein sequence | MPHRYTLKLA HINDTHSHFD SSRVHFSVDT QGKSYDIYSH SGGYARIQYQ LTKAREEAAS
AGQEFLFLHA GDSFQGTLYF NHFKGVANAH LLNLLQPDAM VLGNHEVDDG SAPILAFLND
ISFPLLAGNM DMSQEASDKP SPIKGHKRLL DYDDANGRAK VLIKPLKDKQ VAIIGITLDQ
MAEIARPDPD MIFINAIETT RNTVAHLKTQ GIDHILVLSH LGFNQDKILA EQVDGISLIV
GGHTHTLQGE FKALGLSSTS YGVRVNNTAI LHAGKHAETI GIADIEFSES GQVISLDGHN
YFMLDDQFIL ESKHGITPSD YDAIRAYLSS HPGIRGDKED ALVTQVINAQ YRPAIEALEK
QVLGFIPRNL VHTRLPSKSL PHGSEIAPLV CKSIYHEAKL MYPRVDFALH NAGGVRQSLN
KGELTVADVA GRLLPFELSL VKYQIRGQHL YEAIESAINS ATNNSVTGTG AGSFPYTYGL
KYFYDGRKPQ GQRILSLEVL RSDGAADEPE VWESVDREQH YFGVSSAYTA SGKEGYYPLL
QACWQQAIEG LTLPSAFIRF MSHEQSLKQD ILPQIEYISH I
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