Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1425 |
Symbol | |
ID | 5610230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1689018 |
End bp | 1689563 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640932291 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001473164 |
Protein GI | 157374564 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.167968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCAA TTCAGATGCT CTCGCACCAG CCACAATTCT CCCTGATCCC ATATCGTGCG TGTTATGCCC AATCGGTAAG TCAGATTTTT CATGATGCGA TCCGTTATAT TGATGATGTG TACTCGATAG AGCAAAAACA AGCCTGGTCA CCCAAACCCA GATCGCCCTA TCATTGGAAC AAACGGTTAA CGAGAAGCAA AGCCTGGTTG GTTGTGGATG AGGCTATGAT TGAAGGCGGG CACCCTAAGT GTTGTGGTTT TATCAATGTT GAGACGCACT TTAACAATAG AGGCTACATA GACAGCCTAT ATGTTCACCC TGCTTATCAG CATTGTGGCG TTGGCCATAA ACTCTATGAA GCTCTGGAAG AGTGGGCTTT AGAGCAGGAT TACCCTGACT TAACTGTCGA TGCATCCCTG CTCTCTAAGT GGCTCTTTCT CTCCCATGGC TTCAAAGTGC AACATAAGAG CTATCAGGAA AAGCTAGGCC AGATATTTAT GGGTTTTCTT ATGAGTAAGG CACTTAAAGA AACTATAAGG TCATAA
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Protein sequence | MSSIQMLSHQ PQFSLIPYRA CYAQSVSQIF HDAIRYIDDV YSIEQKQAWS PKPRSPYHWN KRLTRSKAWL VVDEAMIEGG HPKCCGFINV ETHFNNRGYI DSLYVHPAYQ HCGVGHKLYE ALEEWALEQD YPDLTVDASL LSKWLFLSHG FKVQHKSYQE KLGQIFMGFL MSKALKETIR S
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