| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1379 |
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| Symbol | |
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| ID | 5612700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1639214 |
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| End bp | 1639507 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932244 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473118 |
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| Protein GI | 157374518 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3042] Putative hemolysin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATA TGAACCTTGA TTTGTTTGGC AAGATCTCAT TTGAGAAGGT GCTTAACGGC
GTCTTTATCG GTGTCGGTCT GGTTATTATT TTCTTAGCCC TTGCGGCATG TTCCATTCAT
GAAGAGGCCG CTATGGCAAA CATGAGTAAC CCGGCTTCCG ACTACTGCCT TGCATTGGAT
GGAAAGCTGG AGATTGTCAG CGGTCCCGAT GGACAACAAG GTATTTGCAC GCTTCCCTCG
GGTGAAGTGA TTGAAGAGTG GGAATTGTAT CGTCGAGAAC ATCAAGATAA ATAA
|
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| Protein sequence | MKNMNLDLFG KISFEKVLNG VFIGVGLVII FLALAACSIH EEAAMANMSN PASDYCLALD
GKLEIVSGPD GQQGICTLPS GEVIEEWELY RREHQDK
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