| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1368 |
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| Symbol | |
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| ID | 5612137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1621933 |
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| End bp | 1624074 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932233 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473107 |
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| Protein GI | 157374507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG CATACTGCTC GGTTATAACC ACGTGTTTAT TGCTCAGCCA GGGAACGTCA
TGGGCGGCAG AGTTTTCTAA CTGTCCAACT CAAGCATTTA TCATACAAAC CCCCTCCTCT
GTCCCTATCT CTTATGGCGT AGAGCTGGCG ACAGGAAGTT ATGTCATACT TTCAAACGAC
ATGAATCGCA TTAAAGCCTA TAACGGTGTC GGATATAATT ATCATGATAA CTATATTTAT
GGGTGGGATT ACGAAGGCAG TACCTTAGGT AAGACAGGCG ATGATTACAT CATCACGCCG
TTAAACGTCA CTAAGGATAC CTCTGCCGCC GCGGCCGGTA ACTTCTTTGT GGGTGATATC
GCCATCGATG AAAATGTTTG GTACGGCTAT AAAAAAAACA AAGGCTTATT TAAAATCCCC
CTCGATGACC CTAATAACTA TTCAATGTCA TTGGTTGTCG GAAGTACCGA TAATGCCACC
TATAAGATAA CTGACTTTGC TTTCCACCCC AGTGACGGGC AGATCTATGC AGTGACCAAT
GGGGCCACTG GTAGCTTACT GCAGATAGAT CCCTCAAATG GTTCGGCTAA TAACTTAGGT
GTCGTGGTCA CCTCTTCGGG TTCAAATTTT ACCTTCGGTG CCCAGTTCTT CGATCCTGAC
GGAACCCTTT ACCTCAGTAA TAACAGTGAC GGAAAGATCT ATCGCCTCAA TGTCGATGAA
GCGAACCCCA GTGCGGATAT ATTTGCTTAT GGCCCCTCAT CATCGAGCAA TGATGGCGCC
CGCTGCGCCT TGGCCGAGGT CCCCGTTGGA GATAACGTTG ACTTCGGTGA CGCCCCAGAC
TCATACGGCA CCTATATGGC ATCTAATGGT GCCAGACACT CGATTATCGA TGACTTCTAT
CTGGGCTCAC TCGTCGACAA TGAAGCTAAT GGTTACCCAT TGCCGCTTTC TGATGACAGC
AGTGATGGCA TAGATGATGA AGATGGTATC AGCTTTCCGA CTGGCTTCGA GCTGGGTGAA
TCGGCTGTAA TATTAGCGAC CGCTACAGGC ACAGGTGGTT ACCTCAATGC CTGGTTCGAT
TGGAATCAAA ACGGCAGTTT CGACAGTGAT GAACAGGCAA TTATCGGCCA TGCACTTTCT
CCTGGCAGTA ACAGCGTGAG TTTAGATGTG CCAACCTGGG GAAAATCCGG CCAATCCTGG
GCACGATTTC GCTTCAGCAG TCTGGCGGAT ATCGGCCCGA CTGGCGGTGT CGGTGACGGT
GAGGTGGAAG ATCATCAGAT CACCATAACC GAAACCGGGG TCACGATTAA TTACTACCCC
TCATCATCGA GTTACACCTC GGTTGCCTAT GAAGATCTCT ACCCCGATCA GGAAGATTAC
GATATGAACG ACGTCATCTT TCACCTGAGA TTGATCGAAT ATATCAAGAA TAATCAGATA
ATAAGAGTCG AGTTTGAAGC TCAGCTTGCC GCAATGGGCG CCGCCTACCA TAACGGGTTT
GCGATACAAC TACCCGATGT TGCTATGGGC AAGGTTAAAG AAAACTCCAT CGAATGGAGT
ATAGATGACG TTGCTCAGGC AGGCTCTCCA TTAGAGTCAG GACAAACTAA TGCCGTATTT
ATCTTTACCC AAGACTTGTG GGATCACATC AGTTTATCGA CCGGGTGTAA CTACCTGAGA
ACCGAATCGG GTTGTGGCAC CAGCTATCGA ACCACCTGGA AGATGAGAGT CCCCTTCGAG
ACCACGATTG CCCAATCACA GATGCCGGAT TTCCCCTATG ATCCCTTTAT CTTTGCCACT
CCCGGCACCG ACCACGGCTT AGCGGCCAAA AACGTGGTTG GAGAGCTGCC GGGACGCAAG
CTGGAGATCC ACCTGAAAAA CAAGGCTCCG ACCGATAAAT TTGCCACCGC TTATTTCGGA
TCCAGAGAGG ATAGATCCGA CCCCGGTGCG GGCCAATATT TCCTCAATGA GAATGGCATG
AGTTGGGCTA TAGAGATCCC GACCAGTTGG CAACACCCTC TCGAAAGAGA AAGGTTAGAT
ATGACCTATT CGGAATTTCT TAACTTTGCT GCAGATAAAA CGGGAAACAC CAACCCCAAC
TGGTATCTCA ATGCAAACCG ATCACTGATT TTCCAGGATT AG
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| Protein sequence | MKTAYCSVIT TCLLLSQGTS WAAEFSNCPT QAFIIQTPSS VPISYGVELA TGSYVILSND
MNRIKAYNGV GYNYHDNYIY GWDYEGSTLG KTGDDYIITP LNVTKDTSAA AAGNFFVGDI
AIDENVWYGY KKNKGLFKIP LDDPNNYSMS LVVGSTDNAT YKITDFAFHP SDGQIYAVTN
GATGSLLQID PSNGSANNLG VVVTSSGSNF TFGAQFFDPD GTLYLSNNSD GKIYRLNVDE
ANPSADIFAY GPSSSSNDGA RCALAEVPVG DNVDFGDAPD SYGTYMASNG ARHSIIDDFY
LGSLVDNEAN GYPLPLSDDS SDGIDDEDGI SFPTGFELGE SAVILATATG TGGYLNAWFD
WNQNGSFDSD EQAIIGHALS PGSNSVSLDV PTWGKSGQSW ARFRFSSLAD IGPTGGVGDG
EVEDHQITIT ETGVTINYYP SSSSYTSVAY EDLYPDQEDY DMNDVIFHLR LIEYIKNNQI
IRVEFEAQLA AMGAAYHNGF AIQLPDVAMG KVKENSIEWS IDDVAQAGSP LESGQTNAVF
IFTQDLWDHI SLSTGCNYLR TESGCGTSYR TTWKMRVPFE TTIAQSQMPD FPYDPFIFAT
PGTDHGLAAK NVVGELPGRK LEIHLKNKAP TDKFATAYFG SREDRSDPGA GQYFLNENGM
SWAIEIPTSW QHPLERERLD MTYSEFLNFA ADKTGNTNPN WYLNANRSLI FQD
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