| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1351 |
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| Symbol | |
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| ID | 5611394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1606364 |
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| End bp | 1607488 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932216 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001473090 |
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| Protein GI | 157374490 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.759267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTTT GGCGTGTAAC CTGGATAATA AAGATGACAG AACGCGAACT AGAGATACTG
GCACTACTTA AACAAGACCC ACTTATCGCG CAACAGAGCT TAGCCGATCA GTTAGGCATA
AGCCGTTCCG CCGTTGCCGG GCATATCATG AACCTCACCA ATAAAGGCGT CATTCGGGGA
AAAGGTTATA TCTTAGCCGA ATCCCGATAT GCGGTTGTTA TCGGCGGGGC TAATATGGAT
ATTCTTGGCC GTCCATTAAA TTCATTGCAG GTCGGTGATT CAAACCCGGG CAGTGTGAGC
TGCTCTCCCG GAGGCGTCGG GCGTAATATC GCCGAGAACT TAGCAAGGTT AGGTTCCGAG
ACGCGGCTGA TCAGTGCCGT AGGTAAAGAT ACTTATGGGC AGATGATCGT GAGTCAATGC
CAGCAAGCTG GTATCGATAT GAAAGGCTGC TTGCAGCTCA ATGATGTGAA TACTTCCACC
TATCTTTCTG TGCTCGATGG CGACAGCGAC ATGCATGTTG CTATTAATGA CATGGCAATC
CTGGATCGTT TGAGTGTCGA GGTTCTCAAG GAGAAGGAGG AGCTGTTAAG ACGCGCAGAT
CTTATTATTT TGGATGCAAA CCTGTCAGCA GAATCACTGG AATACCTGCT CAATAACTTC
TCCGACAGAC CCATATTTGT GGATACCGTC TCCTGTGTTA AGGCTAAGAA AATAAAGCCA
TTTCTAAGTT CGGTACACAC GTTAAAACCC AATCTTAAAG AGGCCGAGCA GCTCTCAGGG
ATCATCATTG AAGACTATAG TGAGCTACCC GGTTTAGCTA ACTGGTTCCA TAACCAGGGG
GTTAAGCGCA TCTTCCTAAG TCTTGGCAGT GATGGTGTGT TTTACAGTGA TGAAGGTGCT
CAAGCGCTTA TCCCAGCCAT CCCGGTCGCC ATGGTTAATG CGAACGGGGC CGGTGATGCG
TTCCTTGCAG GCCTCGCTCA TGGCTGGATC CAGGAGTGGA GCATAGAGCA CTCAACCAAA
TTTGCTATGG CCGCAGCAGT CGTGGCGCTG TCACACCTTG CGACCATTAA TCCAAATATG
TCAGAAATAT CAGTAAACCG AATTATCAAG GAGTTAACAT GTTAG
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| Protein sequence | MFVWRVTWII KMTERELEIL ALLKQDPLIA QQSLADQLGI SRSAVAGHIM NLTNKGVIRG
KGYILAESRY AVVIGGANMD ILGRPLNSLQ VGDSNPGSVS CSPGGVGRNI AENLARLGSE
TRLISAVGKD TYGQMIVSQC QQAGIDMKGC LQLNDVNTST YLSVLDGDSD MHVAINDMAI
LDRLSVEVLK EKEELLRRAD LIILDANLSA ESLEYLLNNF SDRPIFVDTV SCVKAKKIKP
FLSSVHTLKP NLKEAEQLSG IIIEDYSELP GLANWFHNQG VKRIFLSLGS DGVFYSDEGA
QALIPAIPVA MVNANGAGDA FLAGLAHGWI QEWSIEHSTK FAMAAAVVAL SHLATINPNM
SEISVNRIIK ELTC
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