| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1315 |
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| Symbol | |
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| ID | 5611304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1560187 |
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| End bp | 1560951 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640932168 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473054 |
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| Protein GI | 157374454 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4922] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000687545 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAA CAGCCATAAA AGCACAAGAC GCTTTTTTTA AAGATTTTGA TGCTGTAAAA
ATGAAAGAGT ATTACCGTGA AGATTATATT CAACACAACC CCCATGTACC AACAGGTCTA
GCACCAGCAA TCGGATTTTT ACCGGTATTA AAAGAAGCTG GTCTAACCTA TAAAAACCAT
CGTTTATTGG TAGATGGTGA CTTCATTGTT ATGCATAACA CTTATAATAA TGCTGAAGCA
TTTGGCGCTA AAGAGGTGGT AACGTTTGAT GTATGGCGCA TGCAAGGTGG CCAAGTTGCC
GAGCATTGGG ATGCCATTTC TCCTGTTATT AAAGAAACGG CAAGTGGGCG CTCACAATTC
GACGGCCCAA CACTGGTTAC TGACACCGAC AAAACTAAAG ACAATAAACA ATTAATTGCT
AACTTTATGG AAGATGTATT TTTTGGCAAA GCGCCTGAAA AAATCACTGA ATACATCAGC
ACAGAGCAAT ATGATCAACA TAATACAATG GTAAAAGACG GTTTAGATGG CCTAAATGAC
GCCCTTGCCT ATCTTGCATC ACAAAATAAT ATGTTCGATT ATCACAAAGT TCACCGTATT
CTCGGCGAAG GTAATTTTGT TTTAACTCAA AGCGAAGGGC GTTGGAATGA TAAACCACAA
GCCTTCTATG ATCTATTCCG CATTAAGGAT GGAAAAATTG TAGAGCATTG GGACATCATT
CAAGAAGTAC CCGCCGAAAT GGCTCACGAT AACGGTATGT TTTAA
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| Protein sequence | MKQTAIKAQD AFFKDFDAVK MKEYYREDYI QHNPHVPTGL APAIGFLPVL KEAGLTYKNH
RLLVDGDFIV MHNTYNNAEA FGAKEVVTFD VWRMQGGQVA EHWDAISPVI KETASGRSQF
DGPTLVTDTD KTKDNKQLIA NFMEDVFFGK APEKITEYIS TEQYDQHNTM VKDGLDGLND
ALAYLASQNN MFDYHKVHRI LGEGNFVLTQ SEGRWNDKPQ AFYDLFRIKD GKIVEHWDII
QEVPAEMAHD NGMF
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