| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1296 |
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| Symbol | |
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| ID | 5613565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1538483 |
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| End bp | 1539118 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932149 |
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| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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| Protein accession | YP_001473035 |
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| Protein GI | 157374435 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000136531 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGGGG TAGCGACAAA GTCCGCGTTG AATCTGGCGA GAAGCTTGTA TGAGGCAGGG
ATTAAAAATG AAGGTGTTTT AAAAGCCTTG GCTGATACGC CAAGAGAGAT GTTTTTGGAT
GCGGCGCTTG GTCACAAGGC TTATGAGAAT ACAGCATTAC CCATAGGGCA GGGACAAACT
ATCTCTCAAC CCTATATTGT CGCAAGAATG ACTGAACTTT TATTGGAAAA TGCACCTAAA
AGAGTGTTAG AGATAGGCAC TGGCTCAGGT TACCAAGCCG CCATCTTAGC AAAGCTTGTT
CCTGAACTAT GCACGGTTGA ACGCATAAAG AGCTTACAGA TCCAAGCAAG ACTGCGTCTT
AAGAGGCTGG ATCTTCACAA TATCTCTTTT AAGTATGGAG ATGGTTGGAA AGGCTGGGCT
AATAAAGGGC CGTTCGACTC CATTATGGTT ACGGCCGCTG CCAGCACTAT CCCTGAGGCG
TTGCTTACTC AATTAGCGGA CAAAGGCGTG CTCGTTATAC CTGTAGGTGA TGAGTCTCAA
CAATTACTCA AAGTGGTCCG TCATGGCGAT ACCTTCAGTT CTGAAGTGGT CGAAATGGTT
CGGTTTGTGC CATTGGTTAA TGGTGAACTG GCATAG
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| Protein sequence | MNGVATKSAL NLARSLYEAG IKNEGVLKAL ADTPREMFLD AALGHKAYEN TALPIGQGQT
ISQPYIVARM TELLLENAPK RVLEIGTGSG YQAAILAKLV PELCTVERIK SLQIQARLRL
KRLDLHNISF KYGDGWKGWA NKGPFDSIMV TAAASTIPEA LLTQLADKGV LVIPVGDESQ
QLLKVVRHGD TFSSEVVEMV RFVPLVNGEL A
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