Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1289 |
Symbol | pyrG |
ID | 5611143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1531660 |
End bp | 1533297 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640932142 |
Product | CTP synthetase |
Protein accession | YP_001473028 |
Protein GI | 157374428 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
TIGRFAM ID | [TIGR00337] CTP synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.934915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000000280114 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAACAA GGTATATCTT CGTTACTGGT GGCGTGGTTT CATCACTAGG TAAAGGCATT GCAGCAGCAT CTTTAGCAGC AATTTTAGAG GCCCGTGGCC TTAATGTAAC TATGATGAAG CTGGATCCTT ATATCAATGT AGATCCGGGT ACTATGAGCC CGACGCAGCA TGGTGAAGTG TTTGTTACAG AGGATGGCGC TGAAACCGAT CTCGATTTAG GTCACTATGA GCGTTTTATT CGTACCAAGA TGAATCGTCG TAATAACTTC ACTACCGGTC GTATCTATGA AGAGGTACTT CGTAAAGAGC GTCGTGGTGA TTACTTAGGT GCGACTATTC AGATCATTCC TCATATTACC AATGCGATCA AAGAGAAAGT GCTTGCGGGC GGCGAAGGGC ATGATGTTGC TATCGTCGAG ATTGGCGGAA CCGTTGGTGA TATTGAATCT CTTCCATTCT TGGAATCTAT TCGTCAGTTA AGTGTTGAGT TAGGGCGTGA ACGTTCACTC TTTATGCATT TGACTCTGGT GCCATTCCTT GGCGCTGCTG GTGAAGTGAA GACTAAACCG ACACAACATT CAGTGAAAGA GCTTCGCTCC ATCGGTATTG CACCGGATGT ACTGGTTTGT CGTGGTGACC GTCCTGTTCC AGCGAATGAA AAAGCAAAAA TTTCTCTCTT CTGTAATGTA GAAGAGCGTG CTGTTATCTC GCTTAAAGAC GTAGATAGTA TCTATAAGAT CCCTGCACTA CTTAAGGCGC AAGGTTTAGA TGAACTCGTG GTTAAACGTT TTGGTATTAC TTGTCCTGAA GCCGATCTGC ATGAGTGGGA ACAGGTGATT TATCAAGAAG CTAACCCAAC GGGTGAAGTG ACTATCGGTA TGGTCGGTAA GTACATTGAA CTCCCCGATG CTTATAAGTC TGTAAATGAA GCGTTGAAAC ACGCCGGTCT TTTTAATCGC GTTTCAGTGA ACATCAAGTA TATCGATTCA CAAACGGTTG AAGCTAAAGG CGAAGAGGTA CTTCAGGGCT TAGATGGTAT CTTAGTTCCG GGTGGATTCG GAGAGCGTGG CGTAGAAGGT AAGATCCTTG CGGCTAAATA TGCCCGTGAG AATAACCTTC CTTATTTTGG TATCTGTTTA GGTCTGCAAG TTGCTTTAAT TGAATTTGCA CGTCACGTTG CAGGTCTAGA AGGCGCTCAT TCAACAGAAT TTAACAAAGA AACGCCGCAT CCAGTGGTTG GTTTAATCAC CGAGTGGATC AATGAAGAGG GTAATGTTGA GCAACGCCAT GAAACATCAG ATCTTGGTGG GACAATGCGT CTAGGCGCTC AGCTTTGTCA TCTTTCTGAA GGTTCTAAAG CGGCGATTTC TTATGATGGT AATACTTGTG TAGAACGTCA CCGTCATCGC TATGAAGTCA ACAACAACTA TAAAGATCGT CTTGAAAAAG CAGGCTTAGT ATTTAGTGGT CTCTCTTCCG ACCGCCAGCT AGTTGAGATG ATTGAACTGC CAAACCATCC ATGGTTTGTG GCAGGTCAAT TCCATCCGGA ATTTACATCA ACACCTCGTG ATGGTCAGCC ATTATTCGTA GGATTTGTTG CTGCAGCCAC CGCGTATCAG AAACGCGATT TAGGCTAA
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Protein sequence | MTTRYIFVTG GVVSSLGKGI AAASLAAILE ARGLNVTMMK LDPYINVDPG TMSPTQHGEV FVTEDGAETD LDLGHYERFI RTKMNRRNNF TTGRIYEEVL RKERRGDYLG ATIQIIPHIT NAIKEKVLAG GEGHDVAIVE IGGTVGDIES LPFLESIRQL SVELGRERSL FMHLTLVPFL GAAGEVKTKP TQHSVKELRS IGIAPDVLVC RGDRPVPANE KAKISLFCNV EERAVISLKD VDSIYKIPAL LKAQGLDELV VKRFGITCPE ADLHEWEQVI YQEANPTGEV TIGMVGKYIE LPDAYKSVNE ALKHAGLFNR VSVNIKYIDS QTVEAKGEEV LQGLDGILVP GGFGERGVEG KILAAKYARE NNLPYFGICL GLQVALIEFA RHVAGLEGAH STEFNKETPH PVVGLITEWI NEEGNVEQRH ETSDLGGTMR LGAQLCHLSE GSKAAISYDG NTCVERHRHR YEVNNNYKDR LEKAGLVFSG LSSDRQLVEM IELPNHPWFV AGQFHPEFTS TPRDGQPLFV GFVAAATAYQ KRDLG
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