| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1237 |
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| Symbol | |
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| ID | 5610433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1470468 |
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| End bp | 1471028 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932090 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472976 |
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| Protein GI | 157374376 |
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| COG category | [K] Transcription |
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| COG ID | [COG1678] Putative transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.198149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAGTT TACAAAATCA CTTTTTAATC GCTATGCCCT CACTTAAAGA CACTTTCTTT
GAACGTTCGG TGATCTACAT CTGCGAGCAC GACGAAAAAG GTGCGATGGG AATAATGATA
AACCGCCCTA TTGGTATCGA GGTCAATGAA CTCCTGCTTC AGATGCAACT CAAAGAGGAG
CCGGAACTTA TCACCTCTTT AGGCTCAAAA GTGCTCATCG GGGGCCCGGT AACCCCTGAA
AGAGGATTTG TACTTCACAC ACCTCAATCA ACATGGAACA ACAGTCAGTC ACTCACAGAC
GAACTTATGC TGACCACATC GAGAGATGTA TTGTCGGCAC TAGGAAGCGA TACCGCCCCG
GAGCAATTCA TTGTCGCACT GGGTTATGCA GGGTGGAGCC GAGATCAGCT TGAGCAGGAG
CTGGCAGAGA ATACATGGCT ATCTATTCCT GCCACTGCTG AACTGCTATT TTCTACCGAA
TATGAAGATC GTTGGCAACG AGCCACCGAA TCCTTGGGCT TCGATATATG GCAGTTGTCT
AACCAAACAG GTCACGCATA A
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| Protein sequence | MESLQNHFLI AMPSLKDTFF ERSVIYICEH DEKGAMGIMI NRPIGIEVNE LLLQMQLKEE
PELITSLGSK VLIGGPVTPE RGFVLHTPQS TWNNSQSLTD ELMLTTSRDV LSALGSDTAP
EQFIVALGYA GWSRDQLEQE LAENTWLSIP ATAELLFSTE YEDRWQRATE SLGFDIWQLS
NQTGHA
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