| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1235 |
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| Symbol | |
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| ID | 5610431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1468858 |
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| End bp | 1469895 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932088 |
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| Product | ferrochelatase |
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| Protein accession | YP_001472974 |
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| Protein GI | 157374374 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
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| TIGRFAM ID | [TIGR00109] ferrochelatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.404951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.452003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCTAAAT TTTCAGGTTT ATCTAAAGAT GTTGGACATA CTAAACGCGG AAAAACCGGA
GTGTTACTGG TAAATTTAGG TACACCCGAT GCGCCAACGG CTTCGGCAGT TAGGCGTTAT
CTTGCCGAAT TCCTTTCAGA TCCCAGAGTC GTAGAGATAC CAAAACTCGT GTGGATGTTG
ATATTACACG GAATTATTTT ACGTATCCGG CCTGCAAAGA GTGCAGCATT ATATCAGCAA
GTCTGGACTG ATAATGGTTC CCCTCTGATG GATATCACTC GCAGGCAGAC CGAAAAATTG
GCTCAATATT TTAAAGATAA TGGCTGTAAC AAGAGTCAAA ATGAGACTCA AGATATTTCG
GTTGAGTTTT GTATGCGATA CGGGAAGCCA TCTGTGTCAG ATACCTTGAA GCGAATGCAC
AATGAAGGTG TTGATAAAAT GGTGGTTTTG CCTTTGTATC CACAATACGC GGCACCGACA
ACGGCTTCAG CATTTGATGC GATAGCCAAA GAGCTAATGA GCTGGCGTTA TCTGCCTTCT
TTGCACTTTA TCAATACTTA TCATAATAAT CCTGATTTTA TCCATGCCCT TGCTGAGTCG
ATAAAGCGAG ATTTTACCGC CAATGGTCAA CCGCAAAAAT TAGTTCTCTC CTACCATGGG
ATGCCTGAGC GTAATCTTCA TTTAGGTGAT CCTTACTACT GCTTCTGTAT GCTGACAACT
AAGCTGGTGG TTGAGCAGTT AGGTTTATCT AAAGACCAAT ATATTGCGAC TTTTCAATCT
CGCTTCGGTA AGGCTAAATG GCTAACACCA TATACCGATG CGACTATGGC GTCCTTACCT
GAGCAAGATG TGAGGGATAT CGCGGTAGTG TGTCCAGCTT TCAGTGCCGA TTGTTTAGAG
ACTCTGGAGG AGATAGCCGA AGAAAACCGG CTCATCTTCG AAGAGGCGGG TGGACAGAAA
TATCGATATA TTCCAGCGCT AAATGATGAT GAACTCCATA TCAAGATGAT GGCTAATATC
GTTCAACCCT ATCTTTAA
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| Protein sequence | MAKFSGLSKD VGHTKRGKTG VLLVNLGTPD APTASAVRRY LAEFLSDPRV VEIPKLVWML
ILHGIILRIR PAKSAALYQQ VWTDNGSPLM DITRRQTEKL AQYFKDNGCN KSQNETQDIS
VEFCMRYGKP SVSDTLKRMH NEGVDKMVVL PLYPQYAAPT TASAFDAIAK ELMSWRYLPS
LHFINTYHNN PDFIHALAES IKRDFTANGQ PQKLVLSYHG MPERNLHLGD PYYCFCMLTT
KLVVEQLGLS KDQYIATFQS RFGKAKWLTP YTDATMASLP EQDVRDIAVV CPAFSADCLE
TLEEIAEENR LIFEEAGGQK YRYIPALNDD ELHIKMMANI VQPYL
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