| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1224 |
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| Symbol | |
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| ID | 5614196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1457703 |
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| End bp | 1458644 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932077 |
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| Product | carbonate dehydratase |
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| Protein accession | YP_001472963 |
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| Protein GI | 157374363 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000421173 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.31799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGAAC TATTGGAACC TATCGCAATT TTTACTCATG TTGCCCGTGC CGGCAGCTTT
AGTTCCGCAG CAAGGAAATT GGGAATTTCT AAGTCCAAGG TGAGCACTCA AGTTGCCGAT
CTGGAACATA AATTGGGGGT TCAGCTTATA CAGCGTACTA CGCGAAGCTT GAGCTTAACC
GAAGCCGGAC AGCTATTATA TACCCAAGGT GAAGAGTTAC TCCGAGATGC CGAACAGGCC
ATTGCCAGTG TTCATAATCT TAATGACGCG ACTCGCGGTG TACTCAAGGT GGGGATCTCT
CAGTCCTTTG GTACTATGCA TATCATTCCT GCTTTACCTG AGTTCATGAC GACGCATCCA
GAGCTGGAGT TACAGGTGAG TCTGCTGGAT CATAAAGTCG ATGTTGTCAG TGAAGGGTTG
GATCTACTGC TCACCATGTC TGAGCAGCTG CCATTAGGTA TGGTTGCCAG ACCTTTGATG
AAGTGTCAGT TTTTACTCGC CGCATCGCCT GAATATATCA AGTTGCATGG CCAACCGGAT
CGTCCCGAAC AGTTAGTCGA TCATAACTGC CTTGTTTATC AAGGTGAATG GCATGAGCAT
AGTGTTTGGC AATTTAAACA GGGTGACGAT TATTGCGAAA TAGGCGTATC CGGCAACTTC
AGAGTCGATA ATGCCCCCGC ATTAAAGTCT GCAGCTGTTA GTGGCTTAGG TGTGGTTTAT
CTGGCAAGTT ATCTGCTTGA AGATGAAGTC GCGAAAGGAA CCTTAGTTCC CTTGCTGCAA
GATTGGCAGT TAACTCATCA CCTGCCTCTA CAGGCGGTGT ATCCAAGAAG AAAGCATTTA
GCTCCCAAAG TCAGCGCCTT CATTGACTTT ATTAAAGGAC ATATCGGATC CCCTCCATAT
TGGGATGAAC CTTATGCCGA GTTATACGCA AAACGAAAGT AG
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| Protein sequence | MLELLEPIAI FTHVARAGSF SSAARKLGIS KSKVSTQVAD LEHKLGVQLI QRTTRSLSLT
EAGQLLYTQG EELLRDAEQA IASVHNLNDA TRGVLKVGIS QSFGTMHIIP ALPEFMTTHP
ELELQVSLLD HKVDVVSEGL DLLLTMSEQL PLGMVARPLM KCQFLLAASP EYIKLHGQPD
RPEQLVDHNC LVYQGEWHEH SVWQFKQGDD YCEIGVSGNF RVDNAPALKS AAVSGLGVVY
LASYLLEDEV AKGTLVPLLQ DWQLTHHLPL QAVYPRRKHL APKVSAFIDF IKGHIGSPPY
WDEPYAELYA KRK
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