| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1218 |
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| Symbol | |
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| ID | 5613947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1452564 |
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| End bp | 1452842 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932071 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472957 |
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| Protein GI | 157374357 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2924] Fe-S cluster protector protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000284712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.540197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGCA CAGTAAACTG CGTCTATCTG AAAAAAGAAT CTGAAGGCCT CGGGTTTCAA
CTTTATCCTG GTGAACTGGG TAAGCGCATT TTCGATAACG TCAGTAAAGA AGCCTGGGCT
CTTTGGCAAT CGAAGCAGAC CATGCTTATC AATGAGAAGA AGCTCAACAT GATGAATGTT
GATGACAGAA AGTTTCTTGA AGAGCAGATG ATGAACTTCC TCTTTGAAGG TAAAGAGGTA
GAGATCGAAG GCTACGTCCC TCAAAAAGAT GATGAGTAA
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| Protein sequence | MARTVNCVYL KKESEGLGFQ LYPGELGKRI FDNVSKEAWA LWQSKQTMLI NEKKLNMMNV
DDRKFLEEQM MNFLFEGKEV EIEGYVPQKD DE
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