Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1212 |
Symbol | |
ID | 5614019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1444582 |
End bp | 1445478 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640932061 |
Product | ATPase, BadF/BadG/BcrA/BcrD type |
Protein accession | YP_001472951 |
Protein GI | 157374351 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000148671 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGA ACCAGACGAA GGGGAAACCC TTGTTTATTG GTATTGATGG TGGTGGCAGT AAATGCCGGG CAACGATCTA CTCTGGTGAG GATGCTGTAA TTGGTACTGG TGTCGCCGGG CGCGCAAATC CACTTCACGG TTTATCTCAA ACATTTGAGT CGATTCAGCT ATCTACTGAG CTCGCATTGA AAGATGCGGG AATGAACTTG AGTGACAGTA AAACCTTAGT CGCAGGTATC GGTCTTGCGG GCGTTAATGT TCCCAGGCTT TATAATGATA TCGTTAACTG GGAACATCCG TTTGCCAGTA TGTATGTGAC CACAGATCTG CATACTGCGT GCATCGGAGC ACACAAGGGT GGAGATGGTG CCGTTATCAT TACCGGCACC GGTTCATGTG GCTACGCCAA TGTTAACGGT AAAGAGTTAT GCCTGGGCGG ACATGGTTTT GCCTTAGGTG ATAAAGGAAG TGGCGCCTGG TTAGGTTTAC AAGCTGCAGA GCAAGTTTTA CTTTATCTCG ATGGCTTCGC TAAAGAGACG GAATTAACCG AGCGAGTTCT GAGTTATTTT AAGACTAAAG ATGCGTTGGG AATTGTTGAA CAGCTGGCAG GGCAGTCATC CGGAACTTAC GCAAAACTTG CTCGTATCGT TCTTGAGTGT GCCCATGCTA ATGACGAGGT CGCGCTTGGC ATAGTCAAAG AGGGCGCGGA TTATATCAGT GAGCTGGCGC GCAAGTTATT TGAAATTGAA CCCCCTCGTT TCTCCATGAT TGGTGGTCTT GCAGAGCCCT TGGCTCCATG GCTGGGTAAA GATGTGATTG CTAAGCTTTC ACCCACATTG GCGCCACCGG AATTCGGGGC TGCATACTAT GCCCGTCAGC AGTTTCAGAA CAGATGA
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Protein sequence | MSVNQTKGKP LFIGIDGGGS KCRATIYSGE DAVIGTGVAG RANPLHGLSQ TFESIQLSTE LALKDAGMNL SDSKTLVAGI GLAGVNVPRL YNDIVNWEHP FASMYVTTDL HTACIGAHKG GDGAVIITGT GSCGYANVNG KELCLGGHGF ALGDKGSGAW LGLQAAEQVL LYLDGFAKET ELTERVLSYF KTKDALGIVE QLAGQSSGTY AKLARIVLEC AHANDEVALG IVKEGADYIS ELARKLFEIE PPRFSMIGGL AEPLAPWLGK DVIAKLSPTL APPEFGAAYY ARQQFQNR
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