| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1210 |
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| Symbol | |
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| ID | 5614017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1440127 |
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| End bp | 1440846 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932059 |
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| Product | SapC family protein |
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| Protein accession | YP_001472949 |
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| Protein GI | 157374349 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.007094 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAAGA TAACTCCACT CAATACCGCT GAGCATTCAG GTATCTCAAT CATTGAATCT
AATGATTTCT CTCGATTTTC AAGTGAACAC CTGATACCTG TGGTTGCACA AGAATTTGTT
TCATTAGCGA CTGAATTCCC GATAGTCTTT GTAAAAAACG CTGAAACGGG CCGGTTTACC
CCCGTTGCTA TGATGGGAGT CAAAAAAGGT ATTAACCTGT ATTGCCAAGA CAGCTCTTGG
CGCACTGGTG TAACACCACT AGGATTCAGT AACGCCCCTT TATCTCTCAT GAAAACCTCA
GAGCAAAGTG ACGAAGTTAT GGTGTGTATT GACCAGAGTA GTCATTTAGT CGTCGACGCT
GGCGGACATC GACTATTTAA TGATAATAAG GAGCAAAGTG ATTATCTGAA AGCACGCACT
CAGGCTCTGC TCGATATCGC CTCTTTCAAC CAGCAAACCG CAAGCATCTG TCAGCTGTTC
ACTTCCTTGA AGCTATTGGA ACCAATGCAG CTAAGCGTCA AGCTGATAAA CAATGAACAA
GCCATTAATA TTGATGGCGT CTATGTGGTG GATAAGAAGC GTTTGAATGA GTTGAGTGAC
GAAGACTTTT TATCGTTAAA AAACAGAGGT GTTTTGCCCC TTATTTATGC ACACCTACTT
TCACTTCAGC AGCTCTCGCG CCTTATCGAA AAACAGAACC GATACGATCT CAGCCTCTAG
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| Protein sequence | MTKITPLNTA EHSGISIIES NDFSRFSSEH LIPVVAQEFV SLATEFPIVF VKNAETGRFT
PVAMMGVKKG INLYCQDSSW RTGVTPLGFS NAPLSLMKTS EQSDEVMVCI DQSSHLVVDA
GGHRLFNDNK EQSDYLKART QALLDIASFN QQTASICQLF TSLKLLEPMQ LSVKLINNEQ
AINIDGVYVV DKKRLNELSD EDFLSLKNRG VLPLIYAHLL SLQQLSRLIE KQNRYDLSL
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