Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1206 |
Symbol | |
ID | 5613566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1433874 |
End bp | 1434212 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640932055 |
Product | nitrogen regulatory protein P-II |
Protein accession | YP_001472945 |
Protein GI | 157374345 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0347] Nitrogen regulatory protein PII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGG TCGAAGCCAT TATTAAGCCA TTTAAGTTAG ATGATGTGCG AGAGGCGCTT GCTGAGATAG GGATCACCGG AATGACGGTC TCGGAAGTCA AAGGCTTTGG ACGGCAGAAA GGTCACACCG AGCTTTACCG TGGTGCTGAG TATATGGTGG ATTTTTTACC TAAAGTAAAA ATTGAACTGG TTATTCAAGA TGAGTTATTA GATCAGTCCA TTGAGGTTAT CGTAGATACA GCTCGAACAG GAAAAATCGG CGATGGTAAG ATCTTTGTCA CCGAAGTCGA ACGTGTGATA CGTATCCGTA CCGGTGAAGA AAACGAAGAA GCTGTTTAG
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Protein sequence | MKKVEAIIKP FKLDDVREAL AEIGITGMTV SEVKGFGRQK GHTELYRGAE YMVDFLPKVK IELVIQDELL DQSIEVIVDT ARTGKIGDGK IFVTEVERVI RIRTGEENEE AV
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