Gene Ssed_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1206 
Symbol 
ID5613566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1433874 
End bp1434212 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content44% 
IMG OID640932055 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001472945 
Protein GI157374345 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG TCGAAGCCAT TATTAAGCCA TTTAAGTTAG ATGATGTGCG AGAGGCGCTT 
GCTGAGATAG GGATCACCGG AATGACGGTC TCGGAAGTCA AAGGCTTTGG ACGGCAGAAA
GGTCACACCG AGCTTTACCG TGGTGCTGAG TATATGGTGG ATTTTTTACC TAAAGTAAAA
ATTGAACTGG TTATTCAAGA TGAGTTATTA GATCAGTCCA TTGAGGTTAT CGTAGATACA
GCTCGAACAG GAAAAATCGG CGATGGTAAG ATCTTTGTCA CCGAAGTCGA ACGTGTGATA
CGTATCCGTA CCGGTGAAGA AAACGAAGAA GCTGTTTAG
 
Protein sequence
MKKVEAIIKP FKLDDVREAL AEIGITGMTV SEVKGFGRQK GHTELYRGAE YMVDFLPKVK 
IELVIQDELL DQSIEVIVDT ARTGKIGDGK IFVTEVERVI RIRTGEENEE AV