| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1189 |
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| Symbol | |
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| ID | 5612694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1415748 |
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| End bp | 1417181 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932038 |
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| Product | peptidase M28 |
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| Protein accession | YP_001472928 |
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| Protein GI | 157374328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.157157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCT ATCGTCGTAC TCTGCTCGTC AGCCTATTTT TCACTGGGTT AGTGGGTTGC
CAAAACACCC AGTTGGAAGA ACCAAATATA AAAATAACCA AGCAGTTACA GCAAAGCGCA
TTAACCTCTC CTCTCGCTTA TGATCTTGTT GAATCTCTCA CAGTTGAAGT AGGCCCAAGA
CTCGCGGGCA GCAATAAAGA CCTTGTTGCC GTCCGGTGGG CTGAGAACAA ATTAATTAAA
CTGGGTTTCG ATAAGGTATA CAAAGAAGCC GTTCAGGTTC CTGTATGGTC CCGGGGAGAG
GCTAGGGCTA AAGTGATCTC GCCTTTCTCA CAACCTTTAG TGATCACGGC ATTGGGGGGA
AGCATTGCGA CCCCAAAAGA GGGTTTAAGG GCCCCTATCA TAAGATTTGA CACATTAGAG
TCATTAAAGC TGGCTGATAA AAGTGATGTA GATGGAAAGA TTGTCTTTAT CGACCATATC
ACCGAGCGCC ACAAAACCGG TAAAGGTTAT GGTAAAACGG TTGGCGGACG CTCCCGAGGA
GCCATTAGCG CATCACAGAA AGGGGCCAAA GCAATCGTCA TCCGCTCCAT TGGAACCGAC
CATGACAGAA TGGCGCATAC AGGAATGATG AGGTATAAGG ATGGCGTTGC AAAGATCCCT
GCAGCGGCGA TGTCGAATCC GGATGCCGAC CTTATTAACC TGATACTAAA GCGGGATCCT
AATGTGGTAC TCGATCTCTT CATATCATCA CAAAGCCATG GTTTTGCGAC CTCTTATAAT
GTTATTGCAG AGGTTACCGG CAACAGCAAG CCTGATGAGA TAGTGCTAAT CGGCGCCCAC
TTAGACTCAT GGGATGAAGG AACAGGCGCA ATCGATGACG GAGCTGGTGT TGCCATAGTC
ACGGCAGCGG GCAAGTTAAT TCAAGACCTC CCTCAAAAGC CTGCCCGCAC CGTGCGAGTG
GTACTTTTTG CCGCCGAAGA GGTCGGGCTT GTAGGCGGTA AAGCTTACGC CAAAGCCCAC
AAAAATGAGC TGGAGAAACA TTACATTGCT GCTGAGTCAG ACTTTGGTGC GGGGCGGATA
TATCAGATAG ATTACAGGGT AAACGAGAGT GCTTTAGAAG CGATACACGC GGTCAGCAGT
CCTATGGTTG GTAATGGGGT TACATTAGGT AGTAATACAG CTTCAGGAGG GCCTGATGTC
TCCGTGCTAC CAAAACAGGG TGTCCCTGTA GCTTCACTCA GACAAGATGG CCATGATTAT
TTTGATTACC ACCATACGCC AAACGATACT TTAGACAAAA TAGATCCGAT GGCACTGCAA
CAGAACGTCG CAGCCTATGC ACAATTTGCC TACCTGATGG CACAATCTGA AGTTGAACTC
AGGCCAATTA CAACCGGTGC TAACCTCAAG CCGGTTATTA TTGAAGCAAA ATAA
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| Protein sequence | MKIYRRTLLV SLFFTGLVGC QNTQLEEPNI KITKQLQQSA LTSPLAYDLV ESLTVEVGPR
LAGSNKDLVA VRWAENKLIK LGFDKVYKEA VQVPVWSRGE ARAKVISPFS QPLVITALGG
SIATPKEGLR APIIRFDTLE SLKLADKSDV DGKIVFIDHI TERHKTGKGY GKTVGGRSRG
AISASQKGAK AIVIRSIGTD HDRMAHTGMM RYKDGVAKIP AAAMSNPDAD LINLILKRDP
NVVLDLFISS QSHGFATSYN VIAEVTGNSK PDEIVLIGAH LDSWDEGTGA IDDGAGVAIV
TAAGKLIQDL PQKPARTVRV VLFAAEEVGL VGGKAYAKAH KNELEKHYIA AESDFGAGRI
YQIDYRVNES ALEAIHAVSS PMVGNGVTLG SNTASGGPDV SVLPKQGVPV ASLRQDGHDY
FDYHHTPNDT LDKIDPMALQ QNVAAYAQFA YLMAQSEVEL RPITTGANLK PVIIEAK
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