Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1174 |
Symbol | |
ID | 5611502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 1394678 |
End bp | 1395307 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640932023 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_001472913 |
Protein GI | 157374313 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA CTCAACACAG TGCTGTAAGC ATTCATTACC GTTTATCAAA CGCAAAAGGC GAATTGATCG AAGACTCTTT TGAAGGCGAG CCAATGCTCT ACCTGCATGG GGCAGAAAAT ATGATCCCTG GCCTTGAGTC TCAACTTGAA GGCAAGGTTG CCGGTGATAA ACTTGAGGTG TCTGTTAGTG CTGAAAATGG CTACGGTCCA TATCATGATG GTTTAAAGCA AGAAGTACCA TTGAGTGCAT TCGGCGATAT TCAGGACATC GTTCCTGGTA TGCGCTTTAT CGCAGAAACT GAAATGGGCC AACGCCCGGT TCAAGTTAAA GAAGTGAAAG ATGATATTGT CGTTGTCGAT GGTAACCATC CATTAGCCGG TCAATCTCTG ACCTTTGACG TCGAAGTTCT TGATGTTCGT GAAGCTACAG CTGAAGAGAT CGCTCACGGT CATATCCATG CACATGGCGG TTGCGGATCA GAAGGTGGTC ACGAGCACAG CCATGAAGGC GGTTGTTGTG GCGGTTCAGA CCATGAACAT AGCCATGAAG GTGGCTGCTG CAGCGACAAG CATGACGAGC CAGCTAAAGA AGGCTGTGAC GGTAATGGCG GTTGCGGCTG CAGACACTAA
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Protein sequence | MKITQHSAVS IHYRLSNAKG ELIEDSFEGE PMLYLHGAEN MIPGLESQLE GKVAGDKLEV SVSAENGYGP YHDGLKQEVP LSAFGDIQDI VPGMRFIAET EMGQRPVQVK EVKDDIVVVD GNHPLAGQSL TFDVEVLDVR EATAEEIAHG HIHAHGGCGS EGGHEHSHEG GCCGGSDHEH SHEGGCCSDK HDEPAKEGCD GNGGCGCRH
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