| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1166 |
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| Symbol | |
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| ID | 5614053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1387039 |
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| End bp | 1388142 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932015 |
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| Product | oxidoreductase FAD-binding subunit |
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| Protein accession | YP_001472905 |
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| Protein GI | 157374305 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG ATACGATTTC AAAACCATAT TCTGATGAGT TGCAGCTAAC CTCTCCCAGT
TGGCAACATG GGGACGTTGA ACTTTTATGT GTAGAAAAAT GGCACGAAAC CCATGATGTG
ATTAGCTTTC GTTTTCAAGG TGCTCAACCG GTAAAGTTTC AGTTTAAGCC CGGCCAATTT
TTAACGTTCA AGACCGAAAT AGATGGACAG CTAACTTACC GTAGCTATAC GATCTCTTCA
TCGCCCTCTC GTCCTTACTC TATCGTTGTG ACGATTAAAC GTATCGAAGG TGGAGTTGTG
TCTAATCATT TAGCCGATTC ACTCAATGTG GGTGATACCA TCACAGCAAC CGGGCCGGAT
GGCGTATTTA ACCTGGTTGA TATTAAAGCC GATAAGTTTT TGTTCTTGAG TGCCGGCAGC
GGTATTACGC CTATGTATTC GATGTCTCGT TGGTTAACCG ATACTCAGGT TGGAGCCGAT
ATCGCCTTTC TGCATTGTGC TAAGAGTCCA GAAGATCTGA TCTTTAAGTC TGATTTAGAA
AGAATTAATC ACAATAACCC GGCTTTCAAA TTAAGTTTGA TTCTTGAGTC CGGTGTAGAG
CAAATAGGGA ATAGGTTAGC CTGTGAGTCT GGCCGTATCA ATGCCGATAA CCTCAAGAGC
TTAGTCGAAG ATTTTCACCA GCGAACAATT TTTGTCTGTG GACCCGAACC TTTTATGAAA
GGGGTCAAGT CTCTTTTAGA AGAGATAGGT TTCGATATGT CTATGTACCA CCAGGAGAGT
TTCGGTGGTG TCGCCGTGAC CTCTGAGATG GACAATGGTA CCGACTTAGG TGCAGTGACA
GAGCAAACTG CTTTTATGCT CAGCATAGGC GAGCGTCGCA GAAGTATGAG CCAGGATCAG
AGCTTACTCG AAGGGATTGA AGCCGAAGGG TTACCCATCA TTGCAGCTTG CCGTTCCGGT
GTTTGTGGGG CATGTAAGTG TCAGGTATTA GAGGGCGAGA CCGAATCCAG TAGCCAAATG
ACACTGACAG CGGATGAAAT TGCACAAGGT TATGTACTTG CTTGCTCTAC AAAAATGAAG
TCAGATATAT CTCTGGCGCT GTAA
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| Protein sequence | MTTDTISKPY SDELQLTSPS WQHGDVELLC VEKWHETHDV ISFRFQGAQP VKFQFKPGQF
LTFKTEIDGQ LTYRSYTISS SPSRPYSIVV TIKRIEGGVV SNHLADSLNV GDTITATGPD
GVFNLVDIKA DKFLFLSAGS GITPMYSMSR WLTDTQVGAD IAFLHCAKSP EDLIFKSDLE
RINHNNPAFK LSLILESGVE QIGNRLACES GRINADNLKS LVEDFHQRTI FVCGPEPFMK
GVKSLLEEIG FDMSMYHQES FGGVAVTSEM DNGTDLGAVT EQTAFMLSIG ERRRSMSQDQ
SLLEGIEAEG LPIIAACRSG VCGACKCQVL EGETESSSQM TLTADEIAQG YVLACSTKMK
SDISLAL
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