| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1149 |
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| Symbol | era |
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| ID | 5610298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1369266 |
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| End bp | 1370273 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931998 |
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| Product | GTP-binding protein Era |
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| Protein accession | YP_001472888 |
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| Protein GI | 157374288 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1159] GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.28675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.946741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAGA AAAACGCGCC AGCAAACAAT GAAGCGGGTA AGCAGAGCGA ACCTAGCTTA
GATGAACTGT TGGCACAGAT GAACAATCCC TCATCGGATG CAAAATACGA TGTGACGTAT
TGCGGCATGG TAGCGATTGT TGGTCGACCA AATGTGGGTA AATCTACGTT ACTCAACAAG
TTACTTGGTC AGAAGATCAG TATCACCTCT AAGAAGCCGC AAACGACCCG TCATCGCATC
ATGGGTATTC ATACCGATGG CGCACGTCAG GTGGTGTTTA TCGATACGCC AGGCTTGCAC
ATGGAAGAGA AGCGAGCCAT CAACCGCCTG ATGAACCGTG CCGCGGCCAG TTCATTAGCC
GAAGTTAGCC TGGTGATCTT TGTTGTCGAC GGCATGACCT GGACCGACGA CGATGAGATG
GTGTTGCGTA AACTGCAAAG CCGTGATGAT GGCCGTAAGA CAGTATTGGC GATCAACAAG
GTCGATAACA TCAAAGATAA GGAAGCACTT TTCCCTTACC TCGAAGAGTT GTCGAAGAAG
TTTGAGTTTG ATGAAATACT GCCGATTTCA GCTACTCAGG GCACCAATGT TCAGCGTATC
TTAGATATGT CAGTCGAATC AGTGCCTGAG TCTCCACATT TCTTCCCGGA AGACTATGTG
ACCGATAGGT CACAGAAGTT CATGGCATCT GAAATTGTTC GCGAAAAGCT GATGCGCTTC
TTAGGTGATG AGCTACCTTA CGATTGTACG GTTGAGATTG AGCAGTTCAA GATGATGGAA
AATGGCGTCT ATCAGATCAA TGCCTTAGTT CTTGTCGAGC GTGAAACACA GAAACGTATG
GTGATCGGCA ACAAGGGCGA TCGCATCAAG AAGATTAGCT CTGCCGCTCG TGTCGATATG
GAAGTCTTGT TCGATAACAA GGTCTTCCTC GAGATGTGGG TTAAGGTTAA GTCCGGTTGG
GCCGATGATG AGCGTGCACT TCGCAGCTTA GGCTATGGCG AGGAGTAA
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| Protein sequence | MTKKNAPANN EAGKQSEPSL DELLAQMNNP SSDAKYDVTY CGMVAIVGRP NVGKSTLLNK
LLGQKISITS KKPQTTRHRI MGIHTDGARQ VVFIDTPGLH MEEKRAINRL MNRAAASSLA
EVSLVIFVVD GMTWTDDDEM VLRKLQSRDD GRKTVLAINK VDNIKDKEAL FPYLEELSKK
FEFDEILPIS ATQGTNVQRI LDMSVESVPE SPHFFPEDYV TDRSQKFMAS EIVREKLMRF
LGDELPYDCT VEIEQFKMME NGVYQINALV LVERETQKRM VIGNKGDRIK KISSAARVDM
EVLFDNKVFL EMWVKVKSGW ADDERALRSL GYGEE
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